ggKbase home page

sw_6_scaffold_114_20

Organism: SW_6_Halosimplex_carlsbadense_69_23

near complete RP 34 / 55 MC: 10 BSCG 25 / 51 MC: 7 ASCG 35 / 38 MC: 4
Location: comp(18839..20356)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUV1_DESRL similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 516.0
  • Bit_score: 260
  • Evalue 3.40e-66
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 516.0
  • Bit_score: 260
  • Evalue 9.70e-67
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEG61348.1}; Flags: Precursor;; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum. similarity UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 516.0
  • Bit_score: 260
  • Evalue 4.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfotomaculum ruminis → Desulfotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1518
ATGTCAGATCGGATCACGAACGGTGGTGTCGACAGGCGTGCGTTCCTGAAAACGGCAGGGGTTACGGGCGCGATAGCATTGGCAGGTTGTTCAGAAGGCGACGGTGGGAGCAACGGCGATTCCGGGGGCGACTCGATAGAGGACGTCGACCCGGCCGACGAGATCTCGGTGATCGCGGAGGACCTGCCGGCGACGGCGGCCCTGAAAGACCTCTCGTCGACGTTCGAGGAGGAGGCTGGGATCGGCGTGAACGTCGAACTCGCGCCGTACCTGCAGGCAGTCGAGAAGATCAACCAGCAGTGGGTCGCGGGGTCGGCGAAGTACGACGCGATCTACTCGGACCCGTACGCGAACACGGCGGCCTACCCCGAGAAACACGTCGAGCTCGACCCGCTCATCGGGAGCGACGCGCTCGATGACGTGCCGGGCGGGGTCAGGGACTTCTTCCGGACGCACGTCCTGACGGACTCCATCCACTCGACAGAGGGTGGGTCGGTCTGGAGCGACCGCGACTGGGGCCCGATGCTGACGCTGCCCTACGACGCGAGCACGCTCCCGATGGCCTACCGGACGGACGTGTTCCACAACGAGGAGTGGTCCAACGCCTTCGAGGAGGAGCACGACTTCCCCTTCCAGCCCGGCCCCGAGCGGACCTGGGACCAGATCATCGAGATGTCCCGCTGGATCAACGAGAACGTGCCCGACGACGTCGTCCCGTACGGCTACGGCGGTGCGGGCAAGCAACACGACGCGCTCCAGCTGGACTTCAACACGTTCTTCTGGGCCCACGGCGGCGAGAACATCACGGGGTACAGCGGTAACATGCGCGACGGCGCGGCGATCTCGTTCCCCGACGACCCCGAGCCAAACCACGCCGGCGACGGGCGGGCCGGCATGACCGGCCCCGAGATCCTCGAGAAGTTCGTCGAACTGTACGAGGTGGCTCACCCGTCGGCGACCTCGTGGGCCTACGGGGGCGTCATCTCGAACTTCGGCAGCGGCGAGTTCGCGATGGGGCCCGTCGTCCACGAGGCGGCGGCCGGCTACGAGAGCGACGACTCGCCCATCGCGGGCAACGTCGAGTGGACGCTGATGCCCCAGGGCGCCAACCGCTCGGTCACCCACTTCGGGCCGGCGGGCATGGGGATCAACGCCGACTCCTCGCTGGCGAAACAGCGCGCCGCCTGGAAGTTCATCGTCTTCGCGACCTCGAAGAGCACCCAGCTCGACGGGCTGAAAAACGCGGGCGGCTCGCTGACCCGCCGGTCGACGTGGAACGCGCCCGAGGTGCAGAACTCGGTCAACGCGCCGCCGGGCGAGGCGCCGATCCCTAACGCCGCGATGCCGCTGGCGACGATGTGGCAGCCGGCGAACATGGGCATGCGTCCACACTCGCGCAACTGGAACGAACTGAACGAGGCGCTGTTCACCGGGGTCTCCCAGGCCCTCAACGGGGAGCTGGAGCCCCAGGAGGCGATGGAGCGGATCGACTCCAACTGGAACGACATCCTGGGCTAA
PROTEIN sequence
Length: 506
MSDRITNGGVDRRAFLKTAGVTGAIALAGCSEGDGGSNGDSGGDSIEDVDPADEISVIAEDLPATAALKDLSSTFEEEAGIGVNVELAPYLQAVEKINQQWVAGSAKYDAIYSDPYANTAAYPEKHVELDPLIGSDALDDVPGGVRDFFRTHVLTDSIHSTEGGSVWSDRDWGPMLTLPYDASTLPMAYRTDVFHNEEWSNAFEEEHDFPFQPGPERTWDQIIEMSRWINENVPDDVVPYGYGGAGKQHDALQLDFNTFFWAHGGENITGYSGNMRDGAAISFPDDPEPNHAGDGRAGMTGPEILEKFVELYEVAHPSATSWAYGGVISNFGSGEFAMGPVVHEAAAGYESDDSPIAGNVEWTLMPQGANRSVTHFGPAGMGINADSSLAKQRAAWKFIVFATSKSTQLDGLKNAGGSLTRRSTWNAPEVQNSVNAPPGEAPIPNAAMPLATMWQPANMGMRPHSRNWNELNEALFTGVSQALNGELEPQEAMERIDSNWNDILG*