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qs_2_scaffold_12

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_12_31

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comp(28754..29530)
DNA (777bp) protein (259aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_2_scaffold_12_32
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29527..30480)
DNA (954bp) protein (318aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
qs_2_scaffold_12_33

Not on your lists

comp(30569..31447)
DNA (879bp) protein (293aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ESS11176.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_2_scaffold_12_34

Not on your lists

31778..33184
DNA (1407bp) protein (469aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qs_2_scaffold_12_35

Not on your lists

33273..34523
DNA (1251bp) protein (417aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_2_scaffold_12_36
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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34492..35502
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45417.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_2_scaffold_12_37
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(35562..36476)
DNA (915bp) protein (305aa)
Beta-lactamase domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NN95_HALUD
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACV11495.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
qs_2_scaffold_12_38
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(36701..37618)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9D3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14345.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_2_scaffold_12_39
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37797..38459
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_2_scaffold_12_trna_1
unknown

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38563..38634
DNA (72bp)
transferRNA
qs_2_scaffold_12_trna_3
unknown

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comp(38892..38965)
DNA (74bp)
transferRNA
qs_2_scaffold_12_40
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(39129..39818)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43219.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_12_41

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comp(40030..41484)
DNA (1455bp) protein (485aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=halophilic archaeon DL31 RepID=G2MLM4_9ARCH
RNA-metabolising metallo-beta-lactamase
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:AEN05627.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_12_42

Not on your lists

41648..41938
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGQ0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06441.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_12_43
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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42577..42999
DNA (423bp) protein (141aa)
30S ribosomal protein S6e n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3I1_9EURY
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
30S ribosomal protein S6e
qs_2_scaffold_12_44
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

43095..43550
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEY4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43239.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_12_45
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(43620..44261)
DNA (642bp) protein (214aa)
Gas vesicle protein GvpE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGU1_9EURY
Gas vesicle protein GvpE {ECO:0000313|EMBL:GAD53586.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
PadR family transcriptional regulator
qs_2_scaffold_12_46
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(44614..44946)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93114.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
transcriptional regulator-like protein
qs_2_scaffold_12_47
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

45198..45719
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWV2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50041.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_12_48
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(45853..46872)
DNA (1020bp) protein (340aa)
sppA; proteinase IV-like (EC:3.4.21.-)
Putative signal peptide peptidase SppA n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I7A7_9EURY
Putative signal peptide peptidase SppA {ECO:0000313|EMBL:ELZ92690.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurif
qs_2_scaffold_12_49
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(47165..48061)
DNA (897bp) protein (299aa)
Phosphoserine phosphatase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYY0_NATMM
hypothetical protein
Phosphoserine phosphatase {ECO:0000313|EMBL:ELY30829.1}; Uncharacterized protein {ECO:0000313|EMBL:ADD06172.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
qs_2_scaffold_12_50
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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48464..48994
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N778_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47268.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_12_51
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

49043..49867
DNA (825bp) protein (275aa)
nthD; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDE9_HALAR
Endonuclease III {ECO:0000313|EMBL:EMA19231.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282
qs_2_scaffold_12_52
unknown

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50216..50368
DNA (153bp) protein (51aa)

This feature has no annotations

qs_2_scaffold_12_53
unknown

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50399..50617
DNA (219bp) protein (73aa)

This feature has no annotations

qs_2_scaffold_12_54
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50724..51092)
DNA (369bp) protein (123aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AAY8_9EURY
Methylglyoxal synthase {ECO:0000313|EMBL:GAD51928.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
qs_2_scaffold_12_55
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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51566..52474
DNA (909bp) protein (303aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGT8_9EURY
pyridoxal phosphate synthase yaaD subunit
qs_2_scaffold_12_56
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52621..52875)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HZ04_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88958.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_2_scaffold_12_57
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(52838..53083)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LVN9_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58752.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_2_scaffold_12_58
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(53052..53606)
DNA (555bp) protein (185aa)
probable restriction/modification enzyme (EC:2.1.1.- 3.1.21.-)
Type II restriction enzyme, methylase subunits n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DUE9_9EURY
Type II restriction enzyme, methylase subunits {ECO:0000313|EMBL:ELZ38332.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
Displaying items 31-60 of 74 in total

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