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qs_2_scaffold_3450_6

Organism: QS_2_Halobacteriales_68_15

near complete RP 35 / 55 MC: 3 BSCG 27 / 51 MC: 3 ASCG 37 / 38 MC: 2
Location: comp(5155..5382)

Top 3 Functional Annotations

Value Algorithm Source
H/ACA RNA-protein complex component Gar1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CXR1_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 75.0
  • Bit_score: 114
  • Evalue 6.00e-23
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:ELZ27423.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 75.0
  • Bit_score: 114
  • Evalue 8.30e-23
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1 similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 75.0
  • Bit_score: 108
  • Evalue 9.20e-22

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 228
ATGAGACGCGTCGGCGAAGTGGTCCGGACCGCCCAGAACCTCGCGGTCGTCCGCTCGCCCGACGAAACCTGTCCCGACGTCGGAACCGGCGTCGTCGACGAGGACCTCGACGAACTCGGGCGCGTCGTCGACGTCTTCGGCCCCGTGGACCGGCCCTATCTGGCCGTCTCGCTCGACGGCGAGGTCCACCTGCCCGCCCTCGTCGGAACGAGACTCTACGCGCGGTAG
PROTEIN sequence
Length: 76
MRRVGEVVRTAQNLAVVRSPDETCPDVGTGVVDEDLDELGRVVDVFGPVDRPYLAVSLDGEVHLPALVGTRLYAR*