ggKbase home page

qs_3_scaffold_112_27

Organism: QS_3_Halobacteriales_64_16

near complete RP 33 / 55 MC: 5 BSCG 24 / 51 MC: 1 ASCG 35 / 38
Location: 22893..24362

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 493.0
  • Bit_score: 465
  • Evalue 7.30e-128
tRNA-splicing ligase RtcB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVZ5_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 496.0
  • Bit_score: 465
  • Evalue 5.20e-128
conserved hypothetical protein (UPF0027) similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 493.0
  • Bit_score: 462
  • Evalue 2.10e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1470
GTGTTCGAGATCGAGGGCGAGTACACGACGGCGACGGTGATGGGCGAGCGCGATATGTTCGACGACCGGTTCGTCGAGCAAGTGCAACGACTCGTCGATCACGAGGCCTTCACCAATCGAGTCGTCATCCAACCCGACGGCCACCCGGGAGCCGGAGCCGTTATCGGATTCACAATGGCACTCGGCGAGAAAGTAGTTCCTCAAACGGTCGGCAGCGACATCGGCTGTGGTGTCGAAGCCGCTTCCCTCGGCATCGAGGAGCTTCCCGTCTCCTACGCGGAAGCCGACGACCGAATTCGCGAGACCGTCCCCTTCGGTCGGGCGGTGCACGATTTCGACAACGCGATGCACATCGGCAACGACTTCCTCTGGGATACAGTCACCGAGCGCTTCGAGCGGTTCAATAGCTCCTACAGCGAGCGCTCCGGCCGCGAGATCGATCTCGAGGAGTTCACGCCGAACGGCGAGTACGACCTAGGGTATTTCAAAGCGCTCTGTGAGAGGGTGGGCTACAATATCAACCGGGCCATCGCGTCGGCCGGCACGCTCGGCGGGGGCAATCACTTCCTCGAGGTCGCCCGCTCCGAGCAGGGAGGCGATCTCTGGATCGTGCTGCACTCCGGGTCGCGGGGGCTTGGCTCGACGGTCGCGAACTACTGGCAGGACCGGGCGGTCGAAACGCGGCGGGCCGAGCGGGCACGCGAGACACTCGCTGCACTCCTCGAAGAGGGCTATGGCCCCTACCTGAAGTTCGACCCCGAGAAGACAAGCGACGACGACCTGCTCCTGTGGCTCCAGGGCGGGATGGGCGAGTCCTTCATGCGAAAGGAAAAGATCCGCGAGGAACTCGAGGGCGAGGCCATCGACGAGACCTTCGCCCGGCTCAAGGCGGCGATTCCGGGTCGCGGCGAGGCTGTCGCGGGTGATAGCGACGAGGACCTCGCTTTTCTCGAGGGAGCCGAGGCGCATGGCTACTTCGTAGACATGCTCTTCTGCCAGGAGTACGCCGCGACGAACCGCCGGCGGATGATCGAGTTAGCCTGTGAAGCGCTCAGTGTCCCCGAAGCCCCAGTCGAAACCCTCGATTCTCCCCATAACGTCATCGACTTCGAGGACAGCGTGATACGGAAGGGCGCGACCCGCGTTCACGAAAACGAGCGCGCGGTGATCCCCTTCACGATGCAACATGGCTCGATCATCATCGAGGGCAAGGGCAACGAGGAGTGGAACCACTCTTCACCCCACGGCGCTGGCCGGCTGATGAGTCGCACGCAGGCCTTCGAGGACCTCTCGATGGAGGAGTACGAGGACCTGATGAACGGTATCTACTCGACGAGCGTCACCGCCGAAACCTTGGACGAGTCGCCAAGCGCGTACAAGGATCCCGGAGCGATCGAGGAAGCGATGGCCGAAACCGCCACGATCCTCGATCGGCTCGTCCCCGAGCACAGCCTGAAAGCCGAGGACTGA
PROTEIN sequence
Length: 490
VFEIEGEYTTATVMGERDMFDDRFVEQVQRLVDHEAFTNRVVIQPDGHPGAGAVIGFTMALGEKVVPQTVGSDIGCGVEAASLGIEELPVSYAEADDRIRETVPFGRAVHDFDNAMHIGNDFLWDTVTERFERFNSSYSERSGREIDLEEFTPNGEYDLGYFKALCERVGYNINRAIASAGTLGGGNHFLEVARSEQGGDLWIVLHSGSRGLGSTVANYWQDRAVETRRAERARETLAALLEEGYGPYLKFDPEKTSDDDLLLWLQGGMGESFMRKEKIREELEGEAIDETFARLKAAIPGRGEAVAGDSDEDLAFLEGAEAHGYFVDMLFCQEYAATNRRRMIELACEALSVPEAPVETLDSPHNVIDFEDSVIRKGATRVHENERAVIPFTMQHGSIIIEGKGNEEWNHSSPHGAGRLMSRTQAFEDLSMEEYEDLMNGIYSTSVTAETLDESPSAYKDPGAIEEAMAETATILDRLVPEHSLKAED*