ggKbase home page

qs_4_scaffold_80

Search features with annotation key words

Displaying items 31-60 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_80_31

Not on your lists

comp(30713..31369)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y2Z7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07011.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qs_4_scaffold_80_32
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31871..32878)
DNA (1008bp) protein (336aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEP2_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase 2 {ECO:0000313|EMBL:CQR52052.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
qs_4_scaffold_80_33
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32888..34057)
DNA (1170bp) protein (390aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Natronococcus occultus SP4 RepID=L0JVN0_9EURY
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGB37092.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" s
qs_4_scaffold_80_34
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34157..35002)
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQN2_STRRD
binding-protein-dependent transporter inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACZ86429.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosp
qs_4_scaffold_80_35
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34995..35948)
DNA (954bp) protein (318aa)
Permease component of ABC-type sugar transporter n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EF09_THECK
sugar ABC transporter permease
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:AGA58853.1}; Flags: Precursor;; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;"
qs_4_scaffold_80_36
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35950..37467)
DNA (1518bp) protein (506aa)
Extracellular solute-binding protein family 1 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUV1_DESRL
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEG61348.1}; Flags: Precursor;; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.
qs_4_scaffold_80_37
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37664..38947)
DNA (1284bp) protein (428aa)
SAF domain protein n=1 Tax=Halanaerobium hydrogeniformans RepID=E4RKW5_HALHG
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ADQ15706.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Ha
qs_4_scaffold_80_38
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(39003..40535)
DNA (1533bp) protein (511aa)
Carbohydrate kinase FGGY n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH75_THET1
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ACZ43096.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
qs_4_scaffold_80_39
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(40651..42063)
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3W7_9EURY
qs_4_scaffold_80_40
unknown

Not on your lists

comp(42035..42211)
DNA (177bp) protein (59aa)

This feature has no annotations

qs_4_scaffold_80_41
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(42370..44199)
DNA (1830bp) protein (610aa)
MCP domain-containing signal transducer n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLW5_9EURY
MCP domain-containing signal transducer {ECO:0000313|EMBL:ELZ24241.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
htr; MCP domain-containing signal transducer
qs_4_scaffold_80_42
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

44362..45846
DNA (1485bp) protein (495aa)
Dihydrolipoamide S-acyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WRP5_9EURY
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:ELY52159.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotg
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
qs_4_scaffold_80_43
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

46231..46995
DNA (765bp) protein (255aa)
ArcR family transcription regulator n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G028_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ65651.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
arcR3; ArcR family transcription regulator
qs_4_scaffold_80_44
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

47357..48838
DNA (1482bp) protein (494aa)
Xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=3 Tax=Haloferax RepID=M0F8I4_9EURY
Xylulose kinase {ECO:0000313|EMBL:ELZ67696.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
qs_4_scaffold_80_45
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48889..49218)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JR47_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11446.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_4_scaffold_80_46
unknown

Not on your lists

comp(49396..49773)
DNA (378bp) protein (126aa)

This feature has no annotations

qs_4_scaffold_80_47
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(49764..50285)
DNA (522bp) protein (174aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3ST19_NATMM
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADD04965.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba ma
qs_4_scaffold_80_48
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(50364..50858)
DNA (495bp) protein (165aa)
Flavin reductase ActVB protein {ECO:0000313|EMBL:ERJ07266.1}; EC=1.5.1.38 {ECO:0000313|EMBL:ERJ07266.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Flavin reductase ActVB protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5Q1_9EURY
flavin reductase domain protein FMN-binding
qs_4_scaffold_80_49
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(51458..52213)
DNA (756bp) protein (252aa)
Transcription regulator n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVR5_9EURY
Transcription regulator {ECO:0000313|EMBL:EFW91328.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
IclR family transcriptional regulator
qs_4_scaffold_80_50
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

52302..53396
DNA (1095bp) protein (365aa)
transcriptional regulator, TrmB n=1 Tax=Halomicrobium katesii RepID=UPI00037E5E17
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48375.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_4_scaffold_80_51
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

53659..54471
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000363A4CB
Uncharacterized protein {ECO:0000313|EMBL:ELZ34819.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_4_scaffold_80_52

Not on your lists

54657..56144
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003694A5C
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ESS11467.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
tsgA3; putative sugar ABC transporter periplasmic substrate-binding protein
qs_4_scaffold_80_53

Not on your lists

56518..57453
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037111BE
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ESS11465.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
binding-protein-dependent transport systems inner membrane component
qs_4_scaffold_80_54
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

57450..58409
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003788CAF
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERH04507.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
binding-protein-dependent transport systems inner membrane component
qs_4_scaffold_80_55
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

58416..59618
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000375BBD6
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ERH04506.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
ABC transporter
qs_4_scaffold_80_56
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(59881..61218)
DNA (1338bp) protein (446aa)
Levansucrase (EC:2.4.1.10)
Levansucrase {ECO:0000313|EMBL:ACV48051.1}; EC=2.4.1.10 {ECO:0000313|EMBL:ACV48051.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;"
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
qs_4_scaffold_80_57
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

61423..62235
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27441.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_80_58
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

62296..63810
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003606D4F
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:EDY22445.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter
scrB; sucrose-6-phosphate hydrolase
qs_4_scaffold_80_59
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(63962..65071)
DNA (1110bp) protein (370aa)
Oxidoreductase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUI8_9EURY
Oxidoreductase domain protein {ECO:0000313|EMBL:ELZ26901.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
oxidoreductase domain protein
qs_4_scaffold_80_60
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(65863..67269)
DNA (1407bp) protein (469aa)
NHL repeat containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWA7_9EURY
NHL repeat containing protein {ECO:0000313|EMBL:ELZ26933.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
NHL repeat containing protein
Displaying items 31-60 of 63 in total

View Taxonomy