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qs_4_scaffold_2203_3

Organism: QS_4_Halosimplex_carlsbadense_68_82

partial RP 36 / 55 MC: 3 BSCG 27 / 51 MC: 2 ASCG 30 / 38 MC: 1
Location: comp(1906..2877)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCV2_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 324.0
  • Bit_score: 574
  • Evalue 5.30e-161
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 324.0
  • Bit_score: 574
  • Evalue 7.40e-161
transcription factor TFIIB cyclin-related protein similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 327.0
  • Bit_score: 562
  • Evalue 5.90e-158

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 972
ATGAGTGACTCGAGAATCAACGCCCGAACGGACGTACAGGACGAGACAAGCGAGACGAACGAGACGAGCGAGGCGGAGGTCTGCCCGGAGTGTGCGGGGGATCTGGTCGTCGACGAGGAGCGCGGCGAAACGGTCTGTGCGGAGTGTGGCCTGGTCGTCGAGACCGACGAGATAGACCGCGGGCCCGAGTGGCGGGCCTTCGACTCCGCGGAGAAGGACGAGAAGTCCCGGGTCGGCGCCCCGACGACGAACATGATGCACGACAAGGGGCTGTCGACCAACATCGACTGGCGCGACCAGGACGCCTACGGCAACTCGCTGTCCTCGAACCAGCGCCAGAAGATGCAGCGCCTGCGCAAGTGGAACGAACGATTCAGGACGCGCGACTCCAAGGAGCGCAACTTGAAGCAGGCGCTCGGCGAGATCGACCGCATGGCCTCCGCGCTGGGTCTGCCCGAGAACGTCCGCGAGACGGCCTCGGTCATCTACCGGCGGGCGCTCGACGAGAACCTCCTGCCCGGTCGCTCCATCGAGGGCGTCTCGACCGCGGCGATGTACGCCGCCGCCCGCCAGGCCGGCGTTCCGCGCAGCCTCGACGAGATCACCGAGGTGTCCCGCGTCGAGAAAAACGAGATCGCCCGCACCTACCGCTACGTCATCCGCGAACTCGGTCTGGAAGTCCAGCCCGCGGACCCCGAGAGCTACGTGCCCCGGTTCGCTTCCTCGCTACAGATGAGCGACGAGGCCGAACACCGCGCCCGGATGCTGCTCCAGAACGCCAAGGAACAGGGCGTCCACTCGGGCAAGTCACCCGTGGGACTGGCCGCGGCGGCCGTCTACGCCGCCGCGCTTCTCACAAACGAGAAGACGACCCAGGCCGCCGTCTCGGAGGTGGCCGACATCTCCGAGGTGACCATCCGCAACCGCTACCACGAGCTTCTGGAGGCCGAGCAGGGCCTCCCGGTTGCCTGA
PROTEIN sequence
Length: 324
MSDSRINARTDVQDETSETNETSEAEVCPECAGDLVVDEERGETVCAECGLVVETDEIDRGPEWRAFDSAEKDEKSRVGAPTTNMMHDKGLSTNIDWRDQDAYGNSLSSNQRQKMQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGRSIEGVSTAAMYAAARQAGVPRSLDEITEVSRVEKNEIARTYRYVIRELGLEVQPADPESYVPRFASSLQMSDEAEHRARMLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSEVADISEVTIRNRYHELLEAEQGLPVA*