ggKbase home page

qs_4_scaffold_2060_1

Organism: QS_4_Halobacteriales_70_21

partial RP 24 / 55 MC: 1 BSCG 21 / 51 MC: 4 ASCG 23 / 38 MC: 3
Location: comp(2..289)

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 165
  • Evalue 6.20e-39
Probable tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 165
  • Evalue 3.10e-38
Probable tRNA pseudouridine synthase D n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUD_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 96.0
  • Bit_score: 165
  • Evalue 2.20e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 288
ATGCGCGAGGCCCACCCCGTCGAGCAGGCCGTCGGCGTCGAGTACTACGTCTCCGACGCCGACGGCGTGAGCGGGCGCCTCCGGGCGGCTCCCGAGGACTTCCGGGTCCGCGAGCGGGAGGCCTTCGACGTCGACGTCCGGCCGCTGGACGCCGACCCCGGTTCCTACCCCCACCTCGTCTTCCGGGCGACGCTACGGGCCTGGGACACGAACGACTTCGCCGCGGCGCTGTCCGACGCGCTCGGGATGAGCCGCGAACGGGTCTCCTGGGCTGGGACGAAAGACAAA
PROTEIN sequence
Length: 96
MREAHPVEQAVGVEYYVSDADGVSGRLRAAPEDFRVREREAFDVDVRPLDADPGSYPHLVFRATLRAWDTNDFAAALSDALGMSRERVSWAGTKDK