ggKbase home page

qs_4_scaffold_2060_18

Organism: QS_4_Halobacteriales_70_21

partial RP 24 / 55 MC: 1 BSCG 21 / 51 MC: 4 ASCG 23 / 38 MC: 3
Location: comp(11339..11803)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=2 Tax=Halorhabdus RepID=C7NMT2_HALUD similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 154.0
  • Bit_score: 287
  • Evalue 1.10e-74
Transcription factor TFIIB cyclin-related similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 154.0
  • Bit_score: 287
  • Evalue 3.00e-75
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 154.0
  • Bit_score: 287
  • Evalue 1.50e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhabdus utahensis → Halorhabdus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 465
GACGACGACCTCATCCGCGGCCGCTCCATCGAGGGCGTCGCCACTGCCGCCCTGTACGCCGCCTGCCGGAAGGAGGGCATCCCGCGCTCCCTGGAGGAGATCAGCGAGGTCTCCCGCGTCGAGCGGAAGGAGATCGGCCGCACGTACCGGTACATCTCCCAGGAGCTGAGCCTCGAGATGGAGCCGGTCGATCCCACGAAGTACGTCCCCCGCTTCTGCTCTGAGCTCGAACTCTCGGAGGAAGTCCAGACGAAGGCCAACGACATCATCGAGACCACCTCCGCGGAGGGACTGCTCTCCGGGAAGTCCCCGACGGGCTACGCCGCGGCCGCCATCTACGCCGCCTCGCTGCTCTGCAACGAGAAGAAGACCCAGCGGGAGGTCGCCGACGTCGCCCAGGTGACCGAGGTCACCATCCGGAACCGCTACCAGGAACAGATCGAGGCGATGGGCATCCACTCGTAA
PROTEIN sequence
Length: 155
DDDLIRGRSIEGVATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELSLEMEPVDPTKYVPRFCSELELSEEVQTKANDIIETTSAEGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMGIHS*