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qs_9_scaffold_667_22

Organism: QS_9_Halobacteriales_71_21

near complete RP 32 / 55 MC: 5 BSCG 29 / 51 MC: 1 ASCG 36 / 38 MC: 1
Location: 26283..27461

Top 3 Functional Annotations

Value Algorithm Source
nmd protein affecting ribosome stability and mRNA decay; K07562 nonsense-mediated mRNA decay protein 3 id=24616324 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 376.0
  • Bit_score: 613
  • Evalue 2.10e-172
NMD3 family protein {ECO:0000313|EMBL:ESP87750.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 376.0
  • Bit_score: 613
  • Evalue 3.00e-172
nmd protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 372.0
  • Bit_score: 522
  • Evalue 1.40e-145

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Taxonomy

Candidatus Halobonum tyrrellensis → Candidatus Halobonum → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1179
ATGAGCGAGACGCGCGAGCGACGGGAGTTCTGCCCCCGCTGCGGCGACCCGGTGTCCGAGCGGGAGGAGCCGCTCCCCGGCGAGCCGCGCGAGCGGGACCGCGTGCTCTGTGACGCCTGCTATCTGGCGGACTTCGAGCTGGTCGACGCGCCCGAGCGCGTCGAGGTGACCGTCTGCTCCGGCTGCGGCGCGGTCCACCGGGGCAACAGGTGGGTCGACGTCGGCGCGCGCGACTACACCGACGTCGCCGTCGACGAGGTGTCGGAGGCGCTTGCGGTCCACGTCAACGCCGAGGACGTCCGGTGGGGCGTCGAGCCCGAGCAGGTCGACCGGAACGCGATCCGAATGCACTGCACGTTCGCGGGCGTCGTCCGCGGCGTTCGCGTCGAGGAGGAGGCGGTCGTCCCGGTGAAGATCAGCCGCGGCACCTGCGACCGCTGCGGCCGCATCTCCGGCGGGAGCTACGCCGCGGAGGTGCAGGTCCGCGGCCGCGAGCGCGTCCCCGACCCCGAGGAGCAGTCGAGGGCCGTCGAGATCGCCGAGTCGCTCGTCGCCGAGCGCGAGGCCGACGGCGACCGCGAGTCGTTCCTCACGGAGGTGACAGAGCGCCCGGAGGGGACGGACGTGAAGCTCTCAACCAACAAGCTCGGAAAGGCGGTCGCCGCCCGGATCACCGAGGAGCTCGGCGGCAGCTACACGGAGGCGCCGACGCTCGTCACCGAGGACGGCGACGGCAACGAGGTGTACCGCGTCACCTTCGCGGTCCGCCTGCCGAAGTTCCGCCCGGGCGACGTGATCGACCCCGACGACGGGGGCGGGCCGGTGCTCGTGCGCTCGGTGCGGGGCAACCTGAAGGGCGTCCGTCTGGCGACCGGGGAGCCGTACGAGGCGCGCTTCGAGGAGGGGGAGACGCCCGACGCCGAGACGGTCGGCGAGGCCGACGACGCCGTCGAGACGACCGTCGTCGCCGTCGAGGACGAGAACGCGGTGCAGGTGCTGGATCCCGACACCTACGAGGCGGTGACGGTCGCCCGCCCGCCCGGGATCGGCGAGGACGTCGCGACCGTCGACGTGGTGTCCACCGAGTCCGGACCGTACGTGGTTCCGCCGGCGGACGGCGGCGGCGACGTCGACGACGCCCACGCGGCCCACGACGCCAACAGCGGACGGGCGGAGTAG
PROTEIN sequence
Length: 393
MSETRERREFCPRCGDPVSEREEPLPGEPRERDRVLCDACYLADFELVDAPERVEVTVCSGCGAVHRGNRWVDVGARDYTDVAVDEVSEALAVHVNAEDVRWGVEPEQVDRNAIRMHCTFAGVVRGVRVEEEAVVPVKISRGTCDRCGRISGGSYAAEVQVRGRERVPDPEEQSRAVEIAESLVAEREADGDRESFLTEVTERPEGTDVKLSTNKLGKAVAARITEELGGSYTEAPTLVTEDGDGNEVYRVTFAVRLPKFRPGDVIDPDDGGGPVLVRSVRGNLKGVRLATGEPYEARFEEGETPDAETVGEADDAVETTVVAVEDENAVQVLDPDTYEAVTVARPPGIGEDVATVDVVSTESGPYVVPPADGGGDVDDAHAAHDANSGRAE*