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qs_9_scaffold_2774_1

Organism: QS_9_Halobacteria_68_10

partial RP 17 / 55 MC: 2 BSCG 8 / 51 ASCG 13 / 38
Location: comp(1..1752)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C8H9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 298.0
  • Bit_score: 450
  • Evalue 3.50e-123
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 298.0
  • Bit_score: 450
  • Evalue 5.00e-123
transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 298.0
  • Bit_score: 444
  • Evalue 4.20e-122

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Taxonomy

Haloterrigena limicola → Haloterrigena → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1752
ATGGCCCACAGAAACGACGTCGCGACGACGGAGAACCGCACGCGAGATCCACGGACTGACCGCGAGGAGACCGGCGAAGGGACCGACGAGGAGACGAACGCCTGCCCGGAGTGTGGCGCCGGGCTCGTCACCGACGAGGAGCGCGCCGAGACGGTCTGCTCGGAGTGTGGCATCGTCATCGAGTCCGACCAGATCGACCGCGGGCCGGAGTGGCGCGCCTTCGACGCCCAGGAGAAAGACGAGAAGTCCCGCGTCGGCGCTCCGACGACCCAGACGATGCACGACAAGGGGCTGTCGACGACGATCGGCTGGCGCGACGAGGACGCCTACGGCCGGGCGCTGTCCTCCCGGAAGCGCGAGCGCATGAAGCGCCTGCGCACCTGGGACGAGCGCTTTCGCACCAAGACCGCCCGGGAGCGCAATCTCAAGCAGGCCTTGGGCGAGATCGACCGCATGGCCTCCGCGCTGGGCCTGCCGGAGAACGTCCGCGAGACCGCAAGCGTCATCTACCGGCGCGCGCTGGAGGAGGACCTGCTTCCCGGGCGCTCCATCGAGGCGATGGCGACCGCCTCGCTGTACGCCGCCGCGCGCCAGGCCAACACCCCCCGGAGCCTCGATGAGTGTGCGAAGGTAAGCCGCGTCGACCAGCAGTCCTTCGCGCGGGCGTACCGGTACATCGTCTCCGAACTCGGCCTCGCGGTCGAGCCCGCCGCCCCCGAGAGCTACCTCCCGCGGTTCATCTCCGACCTTGACCTGTCCGACGAGGTCGAGCGCCTGGCCCGCGACCTGCTCGACGCCGCGAAGGAGCAGAGCGTCCACTCGGGGAAGTCGCCCGTCGGGCTGGCGGCCGCCTCGATCTACGCCGCCGCCCTCCTGTCGAACGAGCGCGTCACCCAGAGTGCGATCGGCGAGGTGACGGAAGTGAGCGAGGCCTATCCCCCGGCATGGCCGACAAACCCTCCTCCGGATCGCTGTTCGGCGTGCCGTACAATTTCGAGCGCCCGAAGATCGGTCGCATACTCTCGGCGTACTGGCAGCCCGGCGAGGACATGCTCGTCGAGAAGCCCTTCGGCATCGGCTACACCCTCAACCTCGCGAACTGGCGGTCCTGGGTCGTACTCGGGATCGCGGGTGCCCTCCTCTGGCGGGAGCGCAGCGGCGACGACGGGGAGGCCTTCGCGGACGACGAGGAGCCGGTCGAGGTCATCGTCGAGGACTAGGGACACTGCCGCCGAGCGCCGGCCGCCGCCCCTCGCGATCGACGGCTATTTTCCCGTACCGCTCCCCAGCCCGGGTATGCTTCGCTTCGTCACGACCAATCCCGGGAAGGTCCGGGAGGCCCGCGCGTACCTCCCCCGCGAGGTCGAACAGTTCGACTACGACTACGCGGAGATCCAGTCCGACGACCTCGCGGAGATCGCCGCCCGCGGCGCGCGCGAGGCGGTCGCGGAGGTCGGAGACCCGGTGTTCGTCGAAGACTCCGGGCTCTTCGTCGACGCCCTCGGTGGCTTTCCGGGCCCGTACTCCTCGTTCGTCTACGACACGCTTGGGATCGCCCGCGTCGCCGACCTCGCCCACGCCGAAGACGACCGAACCGTGCGGTTTCGCTCCGTGATCGCCTACGCCGACGGCGAGACGATCGAGACCTTCGGGGGCACGGTCATGGGGCGGATCGTCGAACCCCGTGGAGAGGGCGGGTTCGGATACGATCCGATCTTTGAGCACGACGGGGAGACCTTCGCGGAGATGGAG
PROTEIN sequence
Length: 584
MAHRNDVATTENRTRDPRTDREETGEGTDEETNACPECGAGLVTDEERAETVCSECGIVIESDQIDRGPEWRAFDAQEKDEKSRVGAPTTQTMHDKGLSTTIGWRDEDAYGRALSSRKRERMKRLRTWDERFRTKTARERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPGRSIEAMATASLYAAARQANTPRSLDECAKVSRVDQQSFARAYRYIVSELGLAVEPAAPESYLPRFISDLDLSDEVERLARDLLDAAKEQSVHSGKSPVGLAAASIYAAALLSNERVTQSAIGEVTEVSEAYPPAWPTNPPPDRCSACRTISSARRSVAYSRRTGSPARTCSSRSPSASATPSTSRTGGPGSYSGSRVPSSGGSAAATTGRPSRTTRSRSRSSSRTRDTAAERRPPPLAIDGYFPVPLPSPGMLRFVTTNPGKVREARAYLPREVEQFDYDYAEIQSDDLAEIAARGAREAVAEVGDPVFVEDSGLFVDALGGFPGPYSSFVYDTLGIARVADLAHAEDDRTVRFRSVIAYADGETIETFGGTVMGRIVEPRGEGGFGYDPIFEHDGETFAEME