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sw_10_scaffold_1098_4

Organism: SW_10_Halobacteriales_68_16

near complete RP 32 / 55 MC: 7 BSCG 28 / 51 MC: 3 ASCG 34 / 38 MC: 2
Location: comp(3643..5019)

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=24647678 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 459.0
  • Bit_score: 621
  • Evalue 7.00e-175
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 458.0
  • Bit_score: 621
  • Evalue 9.80e-175
truD; tRNA pseudouridine synthase D (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 467.0
  • Bit_score: 597
  • Evalue 3.00e-168

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Taxonomy

halophilic archaeon J07HX64 → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1377
ATGCGCGAGTCCCACCCCGTCGAACGTGTGGTCGGCATCGACTACTACGTCAGCGATGCACCCGGGGTGGGTGGACGCCTCCGGGAGACGCCCGCGGACTTCCGTGTGCGCGAGCGCGAGTGGTTCGAGGCCGAACCGGTCGACGCCGACCCGGACGCCTCCCCCCCCCTCGTCGTCCGTGTGACCCTTCGGGACTGGGACACCAACGACTTCGCGGGGGCGCTGTCGGACCGCCTGGGTATCTCCCGCGAGCGCGTCTCCTGGGCCGGGACGAAGGACAAGCGCGCCGTCACGACTCAGTTGTTCTCCGTTGACGGCGTCTCGCCTGCGGACCTCCCGGACTTATCCGACGTCGACATCGAGGTGGTCGGGCGCGCGGGACGGCCGATTCTCTTCGGCGACCTCGCGGGCAACGAATTCGAGGTCACAATCCGTGAGCCCACGAATCCGGACGACGTCGCGAGGGTGACCGCCGACCTGCGAGCGTTCGCCGGTATCGAGGGCGACGAGCCGCCAGGATTCACCGATGGAGAGCGGACCGTGACTGTCGCAGTGCCGGACTACTTCGGCCAGCAGCGCTTCGGCAGTCTCCGCCCCGTCACCCACGAGGTCGGCCTGGCCATCGTCCGCGGGGACTGGCGCGGCGCCGTGCGCGCCTACGTGGGCAACCCCGGCGAGCGCGAACCCGAGCGGACGCGCCAGGCACGCGCGTTCGTCGACGCGCAGTTCGACGAGACGAGTCCGGACTGGGGGGCTGCCCTCGAGCGGTATCCCGGCCACCTCGGGTACGAGCGGGCGATGCTCCACAGACTCGCCGAGGACGAGGACGACCCCAGCGACTACCGCGGTGCACTCGAGACGGCACCGACCAACCTCCAGCAGTTGTTCGTCAACGCCGCCCAGTCCGATGTGTTCAACCGCTTCCTCTCGAAGCGACTGGCCCGCGGGCTCCCCTTCGCCGAACCGGTCGCCGGCGACGTGGTTTGCTTCGTCGAGACGGACGCTCCCGAGGGGTTCGAGATTCCCGAGACTGACCGCACCCAGCGGGTGACAGACGAGCGCCTCGGGACGGTCAGGCGCCACTGCGAGCGCGGGCGGGCGTTCGTGACCGCGCCGCTTGTGGGCACGGAGACCGACCTCGCCGACGGCGCTCCGGGCGAAATCGAGCGTGCAGTCCTCAAAGACGTGGGCATCCATCCGGCGGATTTCGACCTCCCGGGCGAGTTCGACTCCGCGGGCACCCGTCGCCCGGTGCTCGTGTGGACGGACCTGACCGTCTCGCGGGACCCGCTGTCCTTCGAGTTCGCCCTGCCCCGGGGGTCGTACGCGACCGTCCTGTTGCGCGAGTACCTGAAGTGTGACCCTGCGGACCTGTGA
PROTEIN sequence
Length: 459
MRESHPVERVVGIDYYVSDAPGVGGRLRETPADFRVREREWFEAEPVDADPDASPPLVVRVTLRDWDTNDFAGALSDRLGISRERVSWAGTKDKRAVTTQLFSVDGVSPADLPDLSDVDIEVVGRAGRPILFGDLAGNEFEVTIREPTNPDDVARVTADLRAFAGIEGDEPPGFTDGERTVTVAVPDYFGQQRFGSLRPVTHEVGLAIVRGDWRGAVRAYVGNPGEREPERTRQARAFVDAQFDETSPDWGAALERYPGHLGYERAMLHRLAEDEDDPSDYRGALETAPTNLQQLFVNAAQSDVFNRFLSKRLARGLPFAEPVAGDVVCFVETDAPEGFEIPETDRTQRVTDERLGTVRRHCERGRAFVTAPLVGTETDLADGAPGEIERAVLKDVGIHPADFDLPGEFDSAGTRRPVLVWTDLTVSRDPLSFEFALPRGSYATVLLREYLKCDPADL*