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sw_10_scaffold_1957_1

Organism: SW_10_Halosimplex_carlsbadense_68_20

partial RP 15 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 15 / 38
Location: 1..465

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D442_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 154.0
  • Bit_score: 272
  • Evalue 3.50e-70
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 154.0
  • Bit_score: 272
  • Evalue 4.90e-70
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 154.0
  • Bit_score: 250
  • Evalue 3.10e-64

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 465
GGCCCGAACGAGGGCGACTCGCTGGGCATCGAGCACGGCAAGCCAGACGGGCGGTCGTTCTCGCTGGGGACCGGCGAGGTGACCCGCCGTGACCCGGACGGCACAGTAGTGGTCGAGCGCGAGATGTCCGGGCGGGGCACCTACGACGCGCTCGGCGTCGACCAGCAGGCGGGCGACGTCGCGGTCACGAAGTTCACCGAGGGGAAGTGGTGGTCCCCCACGGTCTACCGCGGCGCGGACGGCGAGAAACGGGGCACGTACGTCAACGTCTGTACGCCGGTCGAGGTGTTCCCCGACGCCGTCCGGTACGTCGACCTGCACGTTGACGTGGTCACACATGCCGACGGAGCGGTCGAGCGCGTCGACGACGACGAACTCGACGCGGCGGTCGCGGCGGGACAGGTCCCGTCCGAGCTGGCCGAACGCGCCCGCGAGGTCGCCGGCGCCGTCGCGAACGCGCTCTGA
PROTEIN sequence
Length: 155
GPNEGDSLGIEHGKPDGRSFSLGTGEVTRRDPDGTVVVEREMSGRGTYDALGVDQQAGDVAVTKFTEGKWWSPTVYRGADGEKRGTYVNVCTPVEVFPDAVRYVDLHVDVVTHADGAVERVDDDELDAAVAAGQVPSELAERAREVAGAVANAL*