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sw_12_scaffold_2028_4

Organism: SW_12_Halococcus_67_38

partial RP 24 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 27 / 38 MC: 3
Location: 1943..2461

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM19_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 172.0
  • Bit_score: 335
  • Evalue 3.80e-89
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 172.0
  • Bit_score: 335
  • Evalue 5.30e-89
transcription initiation factor IIE, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 172.0
  • Bit_score: 302
  • Evalue 9.90e-80

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 519
ATGGCGTTTGAGGACCTCCTCGAAGATCCCGTGGTCCAGACCTATCTCCACGAGCTCGTCGGCCCGCGCGGGATGCCCGTCGCCGCCGCGCCGCCCGACGGCGAAGTGACCGACGAGGAGCTCGCCGAGGACCTCGGCCTCGAACTCAACGACGTCCGGCGCGCGCTGTTCATCCTCTACGAGAACGACCTCGCGAGCTACCGCCGGCTCCGCGACGAGGACTCGGGCTGGCTTACCTACCTCTGGACGTTCGAGTACGAGTCGATCCCCAACAACCTCCGCGACGAGATGGGGCGACTGCTGGAGGCCCTCGAAGAGCGCCGGAAGTACGAGCGGGACAACGAGTTCTACCTCTGTGAGGTCGACTCGCTCCGGTTCGAGTTCGGCGAGGCGATGGAGTTCGGGTTCGAGTGTCCCCAGTGTGGCTCCGCGCTCGAATCGATGGACAACGACCGGTTGATCGACGCGATGGACGACCGCATCGACGCGCTCCACGACGCGCTCACCGTCCCCGCCTGA
PROTEIN sequence
Length: 173
MAFEDLLEDPVVQTYLHELVGPRGMPVAAAPPDGEVTDEELAEDLGLELNDVRRALFILYENDLASYRRLRDEDSGWLTYLWTFEYESIPNNLRDEMGRLLEALEERRKYERDNEFYLCEVDSLRFEFGEAMEFGFECPQCGSALESMDNDRLIDAMDDRIDALHDALTVPA*