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sw_4_scaffold_469_7

Organism: SW_4_Halococcus_67_50

near complete RP 24 / 55 MC: 3 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 3
Location: comp(7333..8184)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM8_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 283.0
  • Bit_score: 511
  • Evalue 6.30e-142
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 283.0
  • Bit_score: 511
  • Evalue 8.80e-142
tfb1; transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 278.0
  • Bit_score: 381
  • Evalue 1.60e-103

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Taxonomy

Halococcus saccharolyticus → Halococcus → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 852
ATGGAATCAAACGGGGTGTGCTCGGAATGTAACGGCCGATTGGTCGCCGTCGATGGGGAGACGACCTGTAGCGACTGTGGTCTCGTCGTCGCGACCGACGAGATCGACCGCGGTCCCGAGTGGCGGTCGTTCGAGCGCGAGACGCGCGAGCGGACCGGCGCGCCGCTGACGCGCTCGCGCCACGATCGCGGCCTCTCGACCGAGATCGGCCGGTCGACACGGCTCACCGGGCGGAAACGCCGGCTGTTCGCGCGACTCCGCCGCCAGCACACCCGCTCGCGGATCGCCTCGAAGGCCGAGCGCAACCGAGTGTACGCCTTCACCGAGATCCGACGGCAAGTCTGTGCGCTCGGACTGTCCGACAGCGTCCGGGATCGCGCCTGCGTGCTGTTCGAGTCGGCCCAGGACGCGGACCTCCTTCGGGGACGCTCGCTCGAAGGCTTCGCGGCCGCGACCCTCTATGCGGTCTGTCGAACCGGCGGTGTCTCGCGCACGCTCGCGGAGATCGTCACGGTCGCGAAGGCCTCGCGTGACGAACTCACGGCTGCGTACGACGCCCTGAACCGCGAACTCGGGCTGCCGACCGGCCCGATCGACCCCACGGAGTATCTCGCGCGGTTCGCATCGCAGTTGGACCTCCCGCACGAGATCGAGGCGCGAGCCCGGGAACTCGTCGCCGAGGGCCGTGATCGCGGCGTGATCGGCGGCCGGAATCCGAGCGGGGTGGCCGCGGCCTGTCTCTACACCGCGGCGACCGAACGCGGCCACACGCTCACCCAAGAGGCGGCCGCCGAAGTCGCGGACGTGACGCCGGTGACGCTCCGGGCGACCTATCAGGAGCTACACGCCTGA
PROTEIN sequence
Length: 284
MESNGVCSECNGRLVAVDGETTCSDCGLVVATDEIDRGPEWRSFERETRERTGAPLTRSRHDRGLSTEIGRSTRLTGRKRRLFARLRRQHTRSRIASKAERNRVYAFTEIRRQVCALGLSDSVRDRACVLFESAQDADLLRGRSLEGFAAATLYAVCRTGGVSRTLAEIVTVAKASRDELTAAYDALNRELGLPTGPIDPTEYLARFASQLDLPHEIEARARELVAEGRDRGVIGGRNPSGVAAACLYTAATERGHTLTQEAAAEVADVTPVTLRATYQELHA*