ggKbase home page

sw_4_scaffold_4732_1

Organism: SW_4_Halosimplex_carlsbadense_69_24

partial RP 29 / 55 MC: 3 BSCG 17 / 51 ASCG 19 / 38
Location: comp(151..690)

Top 3 Functional Annotations

Value Algorithm Source
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 179.0
  • Bit_score: 300
  • Evalue 1.10e-78
flap endonuclease 1 (EC:3.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 179.0
  • Bit_score: 290
  • Evalue 3.10e-76
Flap endonuclease 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW54_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 299
  • Evalue 1.80e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 540
GTGGTCCAGGCACCCGCCGAGGGCGAGGCCCAGGCCGCCCACATGGCCCGCGCCGGCGACGTCGACTACGCCGGCACCGAGGACTACGACGCCCTCCTCTTTGGCGCGCCGCTCACGCTCCGCCAACTCACCAGCAAGGGCGACCCCGAACTGATGGACTTCGAGGCGACCCTGGAACGCCACGACCTCACCTGGGAACAGCTCGTCGACGCCGCCATCCTCATGGGCACCGATTTCAACGAGGGCATCTCGGGTATCGGCCCCAAGACCGCCGTGAAAGCCGTCCGCGAACGCGGCGACATCTGGGGCGTCTTCGAGGCCCGCGACGTCTACGTCGAGAACGCCGACCGCATCCGCGACCTCTTTTTGGAGCCCGCGGTCACCGAGGATTTCTCGTTCGACACCGACCTCGACCCCGACGTCGCGGCCGCGCGCCGCCTCGTCTGCGAGGACTGGGAGGTCGACGAAGCGGAGGTCGAACGCGGCTTCGAGCGCATCGAGGAGAGCCTCGTCCAGACCGGCCTCGACGACTGGACGTGA
PROTEIN sequence
Length: 180
VVQAPAEGEAQAAHMARAGDVDYAGTEDYDALLFGAPLTLRQLTSKGDPELMDFEATLERHDLTWEQLVDAAILMGTDFNEGISGIGPKTAVKAVRERGDIWGVFEARDVYVENADRIRDLFLEPAVTEDFSFDTDLDPDVAAARRLVCEDWEVDEAEVERGFERIEESLVQTGLDDWT*