ggKbase home page

sw_4_scaffold_3730_1

Organism: SW_4_Halobacteriales_64_12

partial RP 18 / 55 BSCG 13 / 51 ASCG 20 / 38 MC: 1
Location: 60..1814

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325, ECO:0000313|EMBL:ELZ44335.1}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325, ECO:000031 similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 582.0
  • Bit_score: 723
  • Evalue 1.80e-205
polA1; DNA polymerase II small subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 590.0
  • Bit_score: 703
  • Evalue 6.60e-200
DNA polymerase II small subunit n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E986_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 582.0
  • Bit_score: 723
  • Evalue 1.30e-205

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum coriense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1755
GTGTCGCCCTCGCCGCCGACGGAGGTCGTCAGGGAACTCACGAGCCGCGGCTATAACGCCGATCGCGAGGCCGTGACCCTGCTCGCCCGGACGTCCGATCCGACCGCGGCGATCTCCCGCGCGCTCGAAGCCGCCCCCGAGGACCTGCTTACCCTCTCGGCGAAGGACGTCCGCAGCGCCGTCGATACGACGCCCGACCGACCCCGGGAGGAGTCAGCCACGGCCACGACGAACGGCGACGACCCGGCGACGGACGGCGGAAGTAGTGCCGACGCGATCGACCCGGCCGACCCGATCAGCGAAACCCCTCCCGCTCCCGACGGCGCTTCGATCGCCGAAACCACGGCAACCACCGGACCTACTGACGCCACCGAAACCGCCGCACCCGGCGCGGCCGCCGAGAACCTCTCGTCCGGCTCGGCCGAATCGACCACTCCTCCCTCCAGTGCTCCCAACCCCTCCGCTTCGAGTGGAGATATCGGCGCGTCAGACGCTCGTCGGACGAATCCTCCAGTGAGAACGGCGGGGTTCGCTCCCCGGGACGCCGCGAAGCGTTCGCTACAGGTCGCCAACGACATGACCGGTCACAGTACCGGCACCGGCGAGTACGGTGATTTCGTCCGCGTGTTTCGCGACCGCTACGAGCGTTTCTCCCGATTACTGCGCTCGCGGGTGAAACACCGCCCGATCGAGGCGATCCGGTCGATGCCCGGCGGCGCGGAAGTCGCTATGATCGGGCTGATCTCCGATATCCGTTCGACCCGAAACGGACACCGATTGGTCGAACTCGAGGACACAACGGGCACCTTTCCCTGCTTGTTCGTCACGGGCAAGGAGGTCTCGGAGGCAGTCGAGGAGTTGCTCTACGACGAGGCGATCGCGATCGAAGGTACGCTCTCGGACGACGCGGGGATCTGTTTCGTCGACGAACTCTACTTCCCGGACGTCCCCCGGACGAACAGTCCCTCGCGGGCCGACCGGCACGTCCGAGCGGCACTCGTCAGTGACGTGCACGTCGGCAGCCGGGAGTTCCGGGCTGACGCCTGGAGTCGCTTCGCCGACTGGCTTCATACGGAGGACGCGAAAGAAATCGAGTACTTACTTCTCGCCGGCGACATGGTTGAGGGCGTCGGCGTCTATCCCGGCCAGGACGAGGAACTCGACGTTGTCGACATCTACGAGCAGTACGAACTCTTCGCGGAGTACCTGAAGGAGGTCCCCGGGGACATGGAGATCGTGATGATCCCCGGCAATCACGACGCCGTGCGGCTCGCCGAGCCCCAGCCCGGTTTCGAGGACGATCTCCGGGAAGTTATGAGCGCGCATGACGCCCGGATCACCTCGAACCCCTCGATGGTCACGATCGAGGGGGTCTCGGTGCTGATGTACCACGGCGTCTCGCTCGACGAGATGATCGCCGAACTCCCCGAGGAGAAAGCGAGCTACGACCACCCCCACCGCGCGATGGCCCAGTTGCTGAAGAAACGCCACGTCGCGCCCCAGTACGGGGGGCATACCCGCCTCGCCCCGGAGGAGAAGGATTACCTCGTGATGGACGACGTGCCCGACGTCTTCCATACCGGCCACGTCCACAAGCTGGGGTATGGCAAGCACCGAAACGTGCTCTCGATCAACAGCGGCTGCTGGCAGGACCAGACCGACTTCCAGAAGCGGGTCAATATCGAGCCCGATGTGGGATACGCGCCGATCGTCGATCTCGATACGCTGGAGCTTACGATCCAGAAGTTCACGTGA
PROTEIN sequence
Length: 585
VSPSPPTEVVRELTSRGYNADREAVTLLARTSDPTAAISRALEAAPEDLLTLSAKDVRSAVDTTPDRPREESATATTNGDDPATDGGSSADAIDPADPISETPPAPDGASIAETTATTGPTDATETAAPGAAAENLSSGSAESTTPPSSAPNPSASSGDIGASDARRTNPPVRTAGFAPRDAAKRSLQVANDMTGHSTGTGEYGDFVRVFRDRYERFSRLLRSRVKHRPIEAIRSMPGGAEVAMIGLISDIRSTRNGHRLVELEDTTGTFPCLFVTGKEVSEAVEELLYDEAIAIEGTLSDDAGICFVDELYFPDVPRTNSPSRADRHVRAALVSDVHVGSREFRADAWSRFADWLHTEDAKEIEYLLLAGDMVEGVGVYPGQDEELDVVDIYEQYELFAEYLKEVPGDMEIVMIPGNHDAVRLAEPQPGFEDDLREVMSAHDARITSNPSMVTIEGVSVLMYHGVSLDEMIAELPEEKASYDHPHRAMAQLLKKRHVAPQYGGHTRLAPEEKDYLVMDDVPDVFHTGHVHKLGYGKHRNVLSINSGCWQDQTDFQKRVNIEPDVGYAPIVDLDTLELTIQKFT*