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RifSed_csp1_19ft_2_scaffold_69559_1

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: comp(2..376)

Top 3 Functional Annotations

Value Algorithm Source
TATA-box-binding protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUT0_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 174
  • Evalue 4.70e-41
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 125.0
  • Bit_score: 222
  • Evalue 2.10e-55
tbp-1; TATA-box-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 125.0
  • Bit_score: 174
  • Evalue 1.30e-41

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 375
TTGACAAAAGCTGAAGATTCAAAGAAATCCATAAAAATAGAAAATGTTGTTGCATCGACCGGGATCGGAACTAAACTTGACCTGAACCAGGTCATAAGTATACTTGAAGGAGCAGACTATAACAAAGAGAGATTCCCCGGTGTTGTTTACAGGACAACGAACCCTAAGACCGCGGCGCTGATTTTCGGGAGTGGCAAAATAGTATGCACTGGCGCAAAAAGCATCGAGGACGTAAGCAGTGGTCTTAACAAGGTCTTTGAGAAGCTTAAGGCCATGGGCATCGATATCCCGAAAAAGCCTGAAATCACTATACAGAACATAGTGGCGTCTGCTGACCTTCACACCGTGTTGAACCTGAACGCTATCGCTATCGGT
PROTEIN sequence
Length: 125
LTKAEDSKKSIKIENVVASTGIGTKLDLNQVISILEGADYNKERFPGVVYRTTNPKTAALIFGSGKIVCTGAKSIEDVSSGLNKVFEKLKAMGIDIPKKPEITIQNIVASADLHTVLNLNAIAIG