ggKbase home page

RifSed_csp2_16ft_3_scaffold_4540_2

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(808..1968)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase xerC Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KCN7_METBM similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 385.0
  • Bit_score: 451
  • Evalue 6.10e-124
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 385.0
  • Bit_score: 451
  • Evalue 1.70e-124
Integrase catalytic subunit {ECO:0000313|EMBL:CCJ36146.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 385.0
  • Bit_score: 451
  • Evalue 8.60e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanoculleus bourgensis → Methanoculleus → Methanomicrobiales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1161
ATGAGTAATGAATTCGCTAGGCTGAAACGACTTGACCCAGTTAATAAGAAGTATTTAGAGGATTATGTCAGGCAACTTGAACTGAAGCAGCTAAAACCTAACACAGTCAAGATAAAACTGTGGAAAGTCTACACATTCATGATTTATACGAATTTCAAAGACAGTAAAAATGTAACCAAAGATGATGTGGAAAATTATGTGATCAACAGGCGGAATAACTGCAGCCCTTTCACCGTCCAGGGGGATATCCTTGAACTCAAACTATTCCTGCGCTGGCTAATGCCTGATAGGGAAATGGAGCTTTTCACTTTTAAAATGAAAAAACCCAAAAAGACGCTACCTGTTGATAAATTGATTACGAGGAATGATATCCAGACTTTGGTAAAGGCATGTAACACACCGAGAGACCGGGCGCTCATAATGCTACTATGGGACTCAGCGGCGCGCCTTAATGAGATCATGAATCTTAATTTGAATCAGGTTGAATTTGATAAATATGGCGCGGTCATTATCGTAGACGGGAAGACTGGACGACGCCGATTAAGGCTAACTGATAGTGTTCCCGACCTTCAAGCATGGGTTAACATACATCCTATGAAAGACATCCCCGATGCACCGCTATTTCTTACATATAATAGATATGGCATGGGTACGAAACGGCTTAATTTCCGCACTGTTGAGAATAGGTTAAAAAATCTTGCTGCAAACCTTAAGATGACTAAAAATATTCATCCTCATGCAATCAGACATGCACGGCTTACAGACCTGGTCAAGTCCGAAGGCAATAAAAAAGGGTTTTCCGAGATGGAATTGAGGATATTAGCTGGATGGGAAAAAAACAGTTCGATGCCAGAGGTTTATGTGCATCTATCGGGAGGAGACGTTGAACGGAAAATCCTTTCAAACGCTGGCTTAATTGAAGAAACAGATGCTGAACGGAAATCTAATGAACTCGAAGCAAAAAAATGTCCGAGGTGCAAGACATTAAATGCTTATGATGCCAAATATTGCTGTTCATGTTCATTTGTGCTTGATGCACGAACTGCAAGGGAAATAGACGATAAAAACAAGATCGTTCCAGAAGTATTCGCGGCTATGCAGAAGGACCCGGAGTTCCTGAAAATGTTCTCAGAGGCGATAGCGAAGGCGGTTAAATCATAG
PROTEIN sequence
Length: 387
MSNEFARLKRLDPVNKKYLEDYVRQLELKQLKPNTVKIKLWKVYTFMIYTNFKDSKNVTKDDVENYVINRRNNCSPFTVQGDILELKLFLRWLMPDREMELFTFKMKKPKKTLPVDKLITRNDIQTLVKACNTPRDRALIMLLWDSAARLNEIMNLNLNQVEFDKYGAVIIVDGKTGRRRLRLTDSVPDLQAWVNIHPMKDIPDAPLFLTYNRYGMGTKRLNFRTVENRLKNLAANLKMTKNIHPHAIRHARLTDLVKSEGNKKGFSEMELRILAGWEKNSSMPEVYVHLSGGDVERKILSNAGLIEETDAERKSNELEAKKCPRCKTLNAYDAKYCCSCSFVLDARTAREIDDKNKIVPEVFAAMQKDPEFLKMFSEAIAKAVKS*