ggKbase home page

RifSed_csp2_16ft_3_scaffold_4540_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(4774..5091)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L12 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY50_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 106.0
  • Bit_score: 147
  • Evalue 6.70e-33
rpl12p; 50S ribosomal protein L12 similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 106.0
  • Bit_score: 147
  • Evalue 1.90e-33
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 160
  • Evalue 1.10e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 318
ATGGAATACGTATATGCAGCGCTATTATTACACAGCGCGGGAAAGAAAGTAACGGATGAAGCGATTACAGCTGTAATCAAGTCAGCAGGTGTAGAACCTGATCCTGTAAGAGCCAAAGCACTTGTTTCAGCTCTTGAAGGCGTCAATATTGAAGAAGCCATATCAAAAGCTGCATTCGCAGCACCAGCAGCGGCTGCACCAGCTGCAGCAGCTCCTGCAGCGGCTGAGGCTCCAAAGAAAGAAGAAAAACCAAAAGAGAAAGATAAAGAAAAAGCTGAAGAAAGCGGAATGGAAGGACTTGGTGCCCTGTTCGGGTAG
PROTEIN sequence
Length: 106
MEYVYAALLLHSAGKKVTDEAITAVIKSAGVEPDPVRAKALVSALEGVNIEEAISKAAFAAPAAAAPAAAAPAAAEAPKKEEKPKEKDKEKAEESGMEGLGALFG*