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RifSed_csp2_16ft_3_scaffold_4540_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(6140..6781)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4J6_METCZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 213.0
  • Bit_score: 278
  • Evalue 3.90e-72
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 213.0
  • Bit_score: 362
  • Evalue 2.20e-97
rpl1p; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 213.0
  • Bit_score: 278
  • Evalue 1.10e-72

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 642
TTGGACCACGAAAAGATATTAGTTGCTGTAAAACAGGCGATGGAACAGTCGCCAGAACGTAAATTTTCAGAAAGTATAGATCTTGCGATCAATCTCAAGAATCTTGATATGAACCTGCCGCAGAACAGGATCGATGAAGAGATCATCCTGCCCAATGGTGTGGGTAAACCCATAAAGATCGCAGTGTTTGCGAAAGGCGAAACTGCCAGCAGAGCAAAAGGCGCAGGAGCTGATCATATTTTCGATCCTGATGAAATAGGTGTTATTGGTGAGGATAAAACAAGAGCAAAGACACTTGCAGACGAGGTAAATTTCTTTATCGCAGAGGCTGCGTACATGCCTTTGATAGGGAAAACGCTCGGTCAGGTACTCGGCCCGAGGGGGAAAATGCCAATACCACTGACGCCGGATAAGGATATAGTCCAGATAATCAATAAAGCCAAGAACTCCATAAAAGTGAGGTCAAAGGACAAAATGACATTTCATTTCTCGGTTGGAAGAAAGGAAATGCCGCCTGAGAAGATTTCAGAGAACATTGAAGCGATAGTGAGCCGCATCGAGCACAGATATGAGCGCGGAATGTATAATGTAAAATCGATATACGTCAAAACCACAATGGGGCCAGCAGTGAGGGTGATCTAA
PROTEIN sequence
Length: 214
LDHEKILVAVKQAMEQSPERKFSESIDLAINLKNLDMNLPQNRIDEEIILPNGVGKPIKIAVFAKGETASRAKGAGADHIFDPDEIGVIGEDKTRAKTLADEVNFFIAEAAYMPLIGKTLGQVLGPRGKMPIPLTPDKDIVQIINKAKNSIKVRSKDKMTFHFSVGRKEMPPEKISENIEAIVSRIEHRYERGMYNVKSIYVKTTMGPAVRVI*