ggKbase home page

RifSed_csp2_16ft_3_scaffold_6443_13

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 12300..13613

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB37028.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB37028.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 428.0
  • Bit_score: 432
  • Evalue 4.70e-118
Restriction modification system DNA specificity domain protein Tax=Vibrio sp. 16 RepID=B8K9P9_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 365.0
  • Bit_score: 388
  • Evalue 7.20e-105
restriction endonuclease EcoAI subunit S similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 427.0
  • Bit_score: 355
  • Evalue 1.50e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina siciliae → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1314
ATGAAACCAGAAATTCTTTTCGATAATTTTGAGGTGCTGACTGAAGCGCCCAATGGTGTGCAGAAGCTGCGAGAACTGATACTGCAACTGGCTATAAGTGGGAAGCTTGTGCCGCAAAATCTGAATAATGAGCCCGCTTCAGAATTATTAAAACGTATCCATGCAACAAAAAGAAATTCTATTGCTAAGAAAAAACTCAAAAAGGAAGAATTATTGGCATCTATCCCATCCAATGGAATCCCATATAAAGCCCCGAATGGATGGGAGTGGGTGAGGTTGGGCGATATATCCGAAAGAATTCACTATGGATATACTGCTTCTGCTGATCCTTTATCGACTGCAATCAGGATGTTGAGAATCACTGATATTCAGGATAATCAAGTGAATTGGAGTACAGTTCCTGGATGTCAAATTGATGAAATAGAGTTTTCCAAATATGAACTTCACCAGAATGATATTCTAATAACCCGGACTGGAGGAACAATCGGAAAGACTTTCCTTGTTGAGGATTTGCCTCTAAAGGCCGTCTTCGCTTCATATTTGATTCGTGTAGTTCCATCACCACTGTTATCTGCCAGATTTCTCAAACTGTTCTTGGAGTCTCCTTTTTATTGGGATCAAATCCGAGCAAACTCTGCTGGCACAGGGCAACCAAATGTGAACGGTGTGGCTTTGAGCAACTTGAAACTCACATTGCCCCCACTCGAAGAACAACGCCGCATCGTCGCAAGAGTTGACCAGCTCATGGCGCTCTGCGACGAGCTTGAGGCACGCCAGCAGAAGAAACGCGAAACCCGCGCGCACCTCAACAGCGCCGCGCTCGACCGGCTGCTCGCTGCCCGCGCGCCTGGGGAGTTTGCAGAGGGCTGGCGGCGCATCAGTGATAATTTTGATTTGCTTTATGATGCACCGGAGAATGTGGGCGCGCTCAGGCAGGCGATTTTGCAGCTTGCTGTGATGGGGAAGCTGGTGGAGCAGGATGAGAGGGATGAACCGGCGTCGGTTCTGCTTGAAAAAATAAAAGCTGAAAAAGAGCAGTTGATTAAAGATAAAAAAATTAATAATGTAAGGGCTTTGCAAACAATTGATGCAGATGAAATCCCATACAACTTACCTAGAAAATGGAAATGGGTTCATCTCGGAGATGTATGCCATGACTGGGGACAAAAGAAACCGGATGTGGAATTCACATATATTGATGTATCTGCAATTGACAAGGAACATGGCATAATATCTGAAGATGTAAAGATTCTCAAGCCAAATGAAGCTCCTTCACGGGCAAGGAAAATAGTTTCTAAAGGGACCATTATTTAA
PROTEIN sequence
Length: 438
MKPEILFDNFEVLTEAPNGVQKLRELILQLAISGKLVPQNLNNEPASELLKRIHATKRNSIAKKKLKKEELLASIPSNGIPYKAPNGWEWVRLGDISERIHYGYTASADPLSTAIRMLRITDIQDNQVNWSTVPGCQIDEIEFSKYELHQNDILITRTGGTIGKTFLVEDLPLKAVFASYLIRVVPSPLLSARFLKLFLESPFYWDQIRANSAGTGQPNVNGVALSNLKLTLPPLEEQRRIVARVDQLMALCDELEARQQKKRETRAHLNSAALDRLLAARAPGEFAEGWRRISDNFDLLYDAPENVGALRQAILQLAVMGKLVEQDERDEPASVLLEKIKAEKEQLIKDKKINNVRALQTIDADEIPYNLPRKWKWVHLGDVCHDWGQKKPDVEFTYIDVSAIDKEHGIISEDVKILKPNEAPSRARKIVSKGTII*