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RifSed_csp2_16ft_3_scaffold_68192_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(4220..4624)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6e Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ82_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 139.0
  • Bit_score: 177
  • Evalue 7.80e-42
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 134.0
  • Bit_score: 225
  • Evalue 3.50e-56
rps6e; 30S ribosomal protein S6e similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 139.0
  • Bit_score: 177
  • Evalue 2.20e-42

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 405
ATGGTAGATTTCAGAGTTGTGGTTTCAGATAGCAAATCGGGGCAGGCGTACCAGATAACAGCCTCGGGGCCAGCTGCCAATAAATTCATTGGTAAGGGTATTGGAGATACTGTAGGTGGAGATGCGGTTGGACTTGCAGGTTATTCGCTCAAGCTAACAGGCGGAACAGATAAGGATGGCTTCCCGATGAGGGCTGATCTCCCGGGGCCTGGAAGAAAGAAGATCTTTGTGGCAGGCGGTGTGGGATATCATCCAAAGGCAGAGGGGGTAAGGAAGAGGAAATCCATGAGAGGGAGAGAGATTTCATCAGATACCGCCCAGATCAATGCCGTTATTGTGGAATACGGGCAAAAGCCTCTGAGCGAGATATTCCCAAAGAAAGAAAAAGAGGAGAAAAAAGAATAG
PROTEIN sequence
Length: 135
MVDFRVVVSDSKSGQAYQITASGPAANKFIGKGIGDTVGGDAVGLAGYSLKLTGGTDKDGFPMRADLPGPGRKKIFVAGGVGYHPKAEGVRKRKSMRGREISSDTAQINAVIVEYGQKPLSEIFPKKEKEEKKE*