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RifSed_csp1_16ft_3_scaffold_28286_5

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(2811..4112)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 454.0
  • Bit_score: 696
  • Evalue 1.30e-197
DNA-directed DNA polymerase Tax=Methanolobus psychrophilus R15 RepID=K4MCR0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 470.0
  • Bit_score: 518
  • Evalue 6.00e-144
DNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 470.0
  • Bit_score: 518
  • Evalue 1.70e-144

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1302
TTGACATATGACAGTTCAGTACTGGTTGTAGGGAGAGAGCACCTCAGGATCCCGGATACCCCCAAACCATTGGTTCCAATAGCTATTGCAGGCAGACATGAGAGCAGCCCTGTAGTGGTATTATCGGATATTACGAATCAATCCACCTGTATAGGAGAATATACTGATTTTGTCCAGTATTTCAAGCACAGATACAGCACGCTCGGAGATATGCTGAGAAAAAGGATAAGTGCAAGACCGATCGAGAGCATAAGGAAGAGGAACCTGGATTCCAAAGAGCAGATCTCAATAATAGGTATGGTCCTGGATGTAAGGACAACAATAAACGGACATAAACTGATCGAAATAGAGGATACCACAGGAACGCTTCGCCTTCTAATACACAAGGAAAAAGACAAAGAGCTGTTCGAACTGGCAGGCACCATACTGATGGACGAGGTGATCGGGGTCACAGGTACCCTTTCAGGCGACGGCAATCTAATGTTCGTTAATAAAATAATAAGACCTGATATCCCCAATTCTCAGGGCACATTGAACAGGTCAAAGGGAAAAGGCAAGGCTGTTCTTATTTCAGATATCCATGTGGGCAGTAAGACCTTCCTTGAAGATGCATGGCTTAAATTCCTGGGCTGGCTTGGGGATGATATCAATTATCTTGTGATAGCAGGTGATGTTGTGGATGGGATAGGAGTATTCCCTGGCCAGGATAAAGAGCTTGCTATATCCGATATTTATGAACAATATGAGAAAGCAGCGGAATATTTAAAAGTTGTCCCAAAACATATAAAGATCATAATCTCCCCAGGTAACCATGATGCTGTGAGGCAGGCCGAGCCTCAGCCGCGCTTCCCTGAAAGGATCATTAGTATGTTCAGGGACGATATCACCTTCGTAGGCAATCCTGCACTTGTTGAGATCGGCGGCGTCAGGGTCCTGATATACCATGGAAGGTCAATGGACGACATAATTGCAGGTACTCCTGGATTTTCATACGGCGACCCGGCAAAACCGATGAGTGAAATGCTGAAGTTCAGGCATCTATCGCCCATATATGGCGGAAGGGTCTCGATCGCTCCTGAAAAGAAAGACCACTTCGTAATAGACACTATTCCTGATATCCTTCATTGCGGGCATGTCCACACAGTAGGGGTCTCGCGATACAAAGACGTATTGACAGTGAATAGCGGCACATGGCAGAGCCAGACCGAGTTCCAGAAACGGATGAACCTCCAGCCCATGCCTGCAAGAGCTACAGTAGTTGACCTTGCGACCATGGAATATAAAATAATTCCCTTTAATTGA
PROTEIN sequence
Length: 434
LTYDSSVLVVGREHLRIPDTPKPLVPIAIAGRHESSPVVVLSDITNQSTCIGEYTDFVQYFKHRYSTLGDMLRKRISARPIESIRKRNLDSKEQISIIGMVLDVRTTINGHKLIEIEDTTGTLRLLIHKEKDKELFELAGTILMDEVIGVTGTLSGDGNLMFVNKIIRPDIPNSQGTLNRSKGKGKAVLISDIHVGSKTFLEDAWLKFLGWLGDDINYLVIAGDVVDGIGVFPGQDKELAISDIYEQYEKAAEYLKVVPKHIKIIISPGNHDAVRQAEPQPRFPERIISMFRDDITFVGNPALVEIGGVRVLIYHGRSMDDIIAGTPGFSYGDPAKPMSEMLKFRHLSPIYGGRVSIAPEKKDHFVIDTIPDILHCGHVHTVGVSRYKDVLTVNSGTWQSQTEFQKRMNLQPMPARATVVDLATMEYKIIPFN*