ggKbase home page

RifSed_csp1_16ft_3_scaffold_68524_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: 2319..2525

Top 3 Functional Annotations

Value Algorithm Source
Lrp-like transcriptional regulator Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM2_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 63.0
  • Bit_score: 81
  • Evalue 3.00e-13
Transcriptional regulator {ECO:0000313|EMBL:KCZ70610.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 63.0
  • Bit_score: 100
  • Evalue 5.10e-19
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 63.0
  • Bit_score: 81
  • Evalue 8.50e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 207
TTGGGTTCATCAAATGGTCAGATCTCGCTTGATGAAATTGATAAGAAAATATTGAACGAGATCCAGCTTGATTTTCCTCTTGTTCACAGGCCGTTCAGGCAGTTGGGCGAGAAGCTTGGGATAGAAGAAGCTGAAGTTATCACACGCATCAAGAGGCTCAGCAAAGATGGCGCCATTCGAAGGATCGGTCCCATTATCAGCACAAAA
PROTEIN sequence
Length: 69
LGSSNGQISLDEIDKKILNEIQLDFPLVHRPFRQLGEKLGIEEAEVITRIKRLSKDGAIRRIGPIISTK