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PLM1_60_b1_redo_sep16_scaffold_305_3

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: comp(1978..2973)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 325.0
  • Bit_score: 436
  • Evalue 5.00e-120
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 325.0
  • Bit_score: 436
  • Evalue 2.50e-119
Probable tRNA pseudouridine synthase B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC89_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 325.0
  • Bit_score: 436
  • Evalue 1.80e-119

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 996
ATGACATTAAAACTTGATACTCTAGAGATCATAAATGATGATGTTACTAACAATAAGTATGGATACTACCATAATGATAGACCACTGGATATTCTTTTAGATTATGGAATTCTCTTATTAGATAAGCCTTCTGGACCAACTAGCCATGAATTGGTTGCTTGGACAAAGAGAATCTTGGGAATTACTAAGGCGGGGCATAGTGGTACCCTCGATCCCGGCACTACCGGTCTATTGCCAATAGGATTAGGAGATGCAACCAAAGCATTATCAATCCTTTTGTTTGGACCAAAGGAATATTATGCTGTTGCGAGAATTCATCAACAAAAAGAAATAGATCAAATTGATAATCTACTTAAAGAGTTTACAGGAGAGATCTACCAAAGACCCCCTCAGAGATCATCTGTAAAACGAGCGACTCGTGTTAGAAGAATTTATGAAATACAAAGACTAGAAAGTGCAGACAACATCATTCTCCTACGTGTTTTGTGTGAAGCAGGAACATACATTAGAAAACTCATTTATGATATCGGTGAAGTTCTTGGAACAGGAGCAACCATGTTTGAATTGAGGAGGACAAGAGTAAGTGTATTTTCAGAAGCCGCTGATAAATTAGTAAGGTTACATGACTTGGTTGACGCTATAGAGACATATAAAGAGACAAAAGAAGAACAAAAAATTCGCTCCATTGTAAAACCAATTGAATTGGCGCTCGAAGGGGTTGTTTCTGTTGCAGTAAAAGATTCTGCAGTAGATGCACTTTGCCACGGTGCGCAAGTGGCGATTCCAGGAATAGTCGCTATTGAAAAGGATTTAAAAAAAGGAAGTCTAGTTGGAATTTATACATTGAAAGGAGAAATTATTGCATTGGGTGAAGCTAATATGAATTCAGAAGAAATTAAACAAAACGACAAAGGGATAGCCTTCAATATAAAGAGATTGATAATGAAGCCTGATACTTATCCACGATGCTGGAAGACCAGTAAAAAGTTGGAATAA
PROTEIN sequence
Length: 332
MTLKLDTLEIINDDVTNNKYGYYHNDRPLDILLDYGILLLDKPSGPTSHELVAWTKRILGITKAGHSGTLDPGTTGLLPIGLGDATKALSILLFGPKEYYAVARIHQQKEIDQIDNLLKEFTGEIYQRPPQRSSVKRATRVRRIYEIQRLESADNIILLRVLCEAGTYIRKLIYDIGEVLGTGATMFELRRTRVSVFSEAADKLVRLHDLVDAIETYKETKEEQKIRSIVKPIELALEGVVSVAVKDSAVDALCHGAQVAIPGIVAIEKDLKKGSLVGIYTLKGEIIALGEANMNSEEIKQNDKGIAFNIKRLIMKPDTYPRCWKTSKKLE*