ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_305_12

Organism: PLM1_60_b1_sep16_Thaumarchaeota_Marine_Group_I_35_23

near complete RP 32 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 38 / 38
Location: comp(8763..9677)

Top 3 Functional Annotations

Value Algorithm Source
mdh; malate dehydrogenase (EC:1.1.1.37) similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 304.0
  • Bit_score: 431
  • Evalue 1.10e-118
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 304.0
  • Bit_score: 431
  • Evalue 5.60e-118
Malate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC78_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 305.0
  • Bit_score: 424
  • Evalue 4.90e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrososphaera viennensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 915
ATGAAAATTACTGTGATAGGAGCTGGCAGAGTGGGCTCTTCTGTGGCACTAAATTGTTCAATGAGGGAACTAGGTGATATTTTACTACTTGATATAGTCCAAGGATTACCGCAGGGTGAGGCAATGGACATTAACCATCAACTGGCAGAGCGTGGAATAGACTGCATCGTACAAGGTTCTAATAACTATCAAGAAATGAAAGGATCAGACTTTGTAGTTGTGGTAGCAGGGGTTGGCAGAAAACCTGGTATGACTCGTATGGACTTGCTGAAAACCAATGCTGAAATAGTCAAGGACATTTGCAATAAAATTAAGAGTTATGCTCAGAATTCAAATATTATTATAGTAACAAATCCACTTGACCCATTGACTTACTTTGTAATCAAGTCACTGGCAGGGCAAAGAACCAATATAATGGGTATGGGCGGAATGTTAGACCTATCAAGGTTTAAAGATCATATCAGCACAGTTACTAGAATCTCTAGAGATTCAATTCAAGCAATGGTAATAAGCGAACACGGAGAAAACATGTTGCCACTTGTTAGATTCTCAAGCATGGGTGGGATACCATTATCTCATTTCATAACAGCAGAGCAATCAGAAAATCTTATCAACAAGACAAAAAAGATAGCAGCTGAAGTAATTTCATTGAAGGGTGCGACAGTCTACGCTCCAGGAAATGCAGTTTCAACCATGGTTGAGAGTATCGTAAAAAACAAAAGAACAATACTTCCAGTATCCGCTTTACTTGAAGGAGAATATGGTTATAGCGACGTATGTATCGGTGTTCCATGCGTCCTTGGAAGTGATGGAATAGAAAGAATAATTGAAATAAAATTAAATGAAGATGAAATGAAAGTCCTTGACCTAGGAGTTCAGAGTGTGAGGAAGGCAATAAAGAGTCTTTCAATATGA
PROTEIN sequence
Length: 305
MKITVIGAGRVGSSVALNCSMRELGDILLLDIVQGLPQGEAMDINHQLAERGIDCIVQGSNNYQEMKGSDFVVVVAGVGRKPGMTRMDLLKTNAEIVKDICNKIKSYAQNSNIIIVTNPLDPLTYFVIKSLAGQRTNIMGMGGMLDLSRFKDHISTVTRISRDSIQAMVISEHGENMLPLVRFSSMGGIPLSHFITAEQSENLINKTKKIAAEVISLKGATVYAPGNAVSTMVESIVKNKRTILPVSALLEGEYGYSDVCIGVPCVLGSDGIERIIEIKLNEDEMKVLDLGVQSVRKAIKSLSI*