ggKbase home page

PLM4_90_b2_sep16_scaffold_508_18

Organism: PLM4_90_b2_sep16_Bathyarchaeota_47_8

near complete RP 25 / 55 MC: 2 BSCG 14 / 51 MC: 1 ASCG 33 / 38 MC: 1
Location: comp(16670..17410)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 244.0
  • Bit_score: 151
  • Evalue 6.40e-34
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 252.0
  • Bit_score: 143
  • Evalue 6.50e-32
Tax=GWC2_Nitrospirae_57_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 242.0
  • Bit_score: 158
  • Evalue 9.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Nitrospirae_57_9_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 741
ATGCAAAAAAACGCAGAAAAAATGCTGTCGACAGGCATAACGCAGTTAGATCAGCTTCTGGAAGGCGGTCTTTTCTTGGGTGAGAACGTCGTATGGGAAGTTGAATCCGCAACATTTGCAGGAGAATTTCTTTACACTTTCATGAGAGAAGGCATTTTGGAAGGAAATCAAGTGCTCTATCTAGATTTCATATATCCTCCGCAGGCCCTAATGCTGCAATTGAAAAACTTGATCACGACTCTTCCAGAAGGGTGGGAGAGCAAGTTCCTTGTATTGGACTGTTTTTCAGAATCTTCAGGTCAGGGCGAACTGGTTTTCCTGGATTTCTATGACCAGGCGCCTACCTGGATCAGGAGAGTTCCCAGCTCAAAAGACCCTGAACAGTTTCACAAATTCTTTGGAAGAATCGAGAGAGAATTCGTCACGCCGGGAACAAGATTGGTTTTCAACAGCCTATCACTGATGGAACATGTTTGGGGTAATGAAGCAGTGAAAGCGTTCTTCAGTCATGTATGCCCAGCGTTGTATGCGTATCAGACCTTAGCTTACTGGACAATAGCCAAGAATGCTCATCCCAAGGAATTCTGCGCCCTTATAGAGCACATAACCCAAGTCGCGATCGACCTAACCAAAGAAGGCGAAAAGAGATTCCTAGAAGTCAGGAAGGCCGGTGCCCGATACGATCCTAAAACCTTCCAACGCCGTGAATACTGGGCCGACGGACTCAAAATCAAACTATAG
PROTEIN sequence
Length: 247
MQKNAEKMLSTGITQLDQLLEGGLFLGENVVWEVESATFAGEFLYTFMREGILEGNQVLYLDFIYPPQALMLQLKNLITTLPEGWESKFLVLDCFSESSGQGELVFLDFYDQAPTWIRRVPSSKDPEQFHKFFGRIEREFVTPGTRLVFNSLSLMEHVWGNEAVKAFFSHVCPALYAYQTLAYWTIAKNAHPKEFCALIEHITQVAIDLTKEGEKRFLEVRKAGARYDPKTFQRREYWADGLKIKL*