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PLM3-1_170_b2_sep16_scaffold_2016_9

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: 7545..7820

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family Tax=mine drainage metagenome RepID=T1BIK9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 82.0
  • Bit_score: 77
  • Evalue 7.40e-12
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EQD53955.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 82.0
  • Bit_score: 77
  • Evalue 1.00e-11
SpoVT/AbrB domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 92.0
  • Bit_score: 52
  • Evalue 4.20e-05

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 276
ATGGCACAAGAAACTGAGATTACAACTATGAGCAAAAAGGGGCAGATAGTCATACCTCAAAAGATACGGAAAAGTCTGAAAATTAAGCCCAGAACAAGATTTGCTGTATATGCGAAGAATGATACGATAATAATGAAGGCGTTCGAGGTACCTAACCTTGAAAAGGAATGGTCGAAAATATTTAGCATCGCAGACAGGAAGAATTTGAAAATTAGTGAAAAAGCAGTCTATGATGAAATCCAGTCATATAGAGCTGGAAAGAGAAGTAATAACTAA
PROTEIN sequence
Length: 92
MAQETEITTMSKKGQIVIPQKIRKSLKIKPRTRFAVYAKNDTIIMKAFEVPNLEKEWSKIFSIADRKNLKISEKAVYDEIQSYRAGKRSNN*