ggKbase home page

PLM3-1_170_b2_sep16_scaffold_12638_3

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: comp(2133..2648)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10e Tax=Candidatus Nitrososphaera gargensis RepID=K0IIF7_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 161.0
  • Bit_score: 246
  • Evalue 1.00e-62
ribosomal protein L16/L10E similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 164.0
  • Bit_score: 273
  • Evalue 2.90e-71
Ribosomal protein L16/L10E {ECO:0000313|EMBL:AIF83741.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 164.0
  • Bit_score: 273
  • Evalue 1.40e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 516
ATGAAGGGTGTTAATTACAGGGAAACCAAGGGAATGCCTTATGTGAGGAGAGAATACATCTCTGGAAAACCTCAGCTAAAGATTGCAAGGTTTTCTTCAGGCCAGTCTAAAGTAGATTATGATTACAAACTTGAATTAATTGTTAGTGAAAAAATGCAGATAAGACATAATGCATTAGAAGCAGCAAGATTGGCGGCAAACAAGACAATGTCTCAAGCAGGAGACATGAGTTTTTTTTCCAGACTTACAGTTTATCCCCATTTAGTCCTACGAGAAAATAAAATGATTGCTACCGCGGGAGCAGATAGGTTACAAGAAGGGATGAGAAGAGCATTTGGTAAGGCAACGGGACTTGCTGCTAGGGTTAAGCCAAATCAATCAATATTTGAAGCATATGTTTCTAAAGCAAACTTACAACTGGCAAAGCGTGGTTTTAAGGTTGCATCAAGCAAATTAGGCTGTCCAATAACTGTTAAAATAACTTCATTAAAAAATAAAGGTATAGAGGATAATTAG
PROTEIN sequence
Length: 172
MKGVNYRETKGMPYVRREYISGKPQLKIARFSSGQSKVDYDYKLELIVSEKMQIRHNALEAARLAANKTMSQAGDMSFFSRLTVYPHLVLRENKMIATAGADRLQEGMRRAFGKATGLAARVKPNQSIFEAYVSKANLQLAKRGFKVASSKLGCPITVKITSLKNKGIEDN*