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PLM3_30_b1_sep16_scaffold_541_5

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: 3145..3699

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.0
  • Coverage: 182.0
  • Bit_score: 125
  • Evalue 5.20e-26
Putative 2'-5' RNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID41_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 182.0
  • Bit_score: 125
  • Evalue 3.70e-26
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 182.0
  • Bit_score: 125
  • Evalue 1.00e-26

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 555
GTGTCAAGGGTATTTATCGCTGCAGATATTTATAAAAAAAATGAGATTCAAAAGATACAACATGATTTGATTTCTTATTTGAATTTGGAAAGAAAAAATGTAAAATTGGTACGACAAGAAAATTTTCATTTTACGCTAGTCTTTTTTGGCGAAATCAACAATTCAATACTTGACAAGATAGTTACTAAAATCTCAGGGATTGAATTTCAATCTTTTGAAATTAAGTATGGCATGATAGGAGCATTTCCAAATAGCAAATGTGCCAAAGTGATATGGATTGGATTGAACGAAGAAACGAAGAGTCCTTTTAACCAAATGTCGTATAAAGTACTATCAAAATTAACAGATTTAGACCTAAAGATAGAAAAAGAGATAATACCACACATAACACTATTTAGAACTAAGGACGCGGCACTAGATTTGAATTTACATAGTAATAGCATTATGTCCAATTTTACGCTTATTGACAAAATAGATACAATTTCTGTAAAAAAGAGCATCACTACATCAGAAGGTCCCATATATGAGAACATAATAACTGTGAAGGGAAAATGA
PROTEIN sequence
Length: 185
VSRVFIAADIYKKNEIQKIQHDLISYLNLERKNVKLVRQENFHFTLVFFGEINNSILDKIVTKISGIEFQSFEIKYGMIGAFPNSKCAKVIWIGLNEETKSPFNQMSYKVLSKLTDLDLKIEKEIIPHITLFRTKDAALDLNLHSNSIMSNFTLIDKIDTISVKKSITTSEGPIYENIITVKGK*