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PLM3_30_b1_sep16_scaffold_3_24

Organism: PLM3_30_b1_sep16_Thaumarchaeota_Marine_Group_I_34_13

near complete RP 33 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 38 / 38 MC: 1
Location: comp(20480..21064)

Top 3 Functional Annotations

Value Algorithm Source
RNase HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 192.0
  • Bit_score: 188
  • Evalue 1.10e-45
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 192.0
  • Bit_score: 188
  • Evalue 5.20e-45
Ribonuclease HII Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG37_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 190.0
  • Bit_score: 184
  • Evalue 7.00e-44

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Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 585
GTGGCGGGAATCTCTGTAAGCAAAAAATCGATTTCAGAAATGATTGACAAAGGAATTAAGGATTCAAAACTACTTACCCCAAAAAAAAGACAAATTCTTTTTGGTCACGTCGTTAGCATTGCAGAATCAATCTGTATTTGTAGAATAAATATAGAGGACATCGATTTTCACGTTTTTAGAAACAATCTAAACATACTAGAAGCAGAAGCTATGGCTATTACAATAAGCAATATGAAATCTGACAAAACCTATGTGGATTCATGCGATGTAAACCCTTCCCGATATCAAAGAACAATAAGTAGTTTTCTCAAAAGAAATAGTACAAAATTAATTTCAATGCATCATGCAGACAAATTGAATGCTGTAGTGTCTGGGGCTTCGATCATCGCAAAAGTAATCCGTGATTCTGAAATAACTAAAATTCGCGTTAAATACGGCGATATAGGAAGTGGATATCCTTCAGACAAGAGAACAATAGAATTTGTAAGAGAATGGTTTAGACAAAAAAATGAAATTCCACCCTTCGCAAGAAAGTCATGGAAGCCTGCTCAAATGATTGTGTCTGGTACGGATCGGTACCATTGA
PROTEIN sequence
Length: 195
VAGISVSKKSISEMIDKGIKDSKLLTPKKRQILFGHVVSIAESICICRINIEDIDFHVFRNNLNILEAEAMAITISNMKSDKTYVDSCDVNPSRYQRTISSFLKRNSTKLISMHHADKLNAVVSGASIIAKVIRDSEITKIRVKYGDIGSGYPSDKRTIEFVREWFRQKNEIPPFARKSWKPAQMIVSGTDRYH*