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S_p1_S3_coassembly_k141_1627793_7

Organism: S_p1_S3_coassembly_Diapherotrites_48_87

near complete RP 32 / 55 MC: 4 BSCG 12 / 51 ASCG 33 / 38 MC: 2
Location: comp(3428..4033)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein, containing S1 domain Tax=Thermococcus sp. AM4 RepID=B7R0P9_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 200.0
  • Bit_score: 114
  • Evalue 1.20e-22
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 200.0
  • Bit_score: 114
  • Evalue 3.40e-23
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 200.0
  • Bit_score: 114
  • Evalue 1.70e-22

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Taxonomy

Thermococcus sp. AM4 → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 606
TTGCTTTTTAAAGGTGTTTTAATGGAAAAACAGTCTTCTTCTGCCAAGACCCTTGTTTTCCCTGGCCAGCACTTGGCAGTGGAAGAAGAGTTCGTGGGCGGGTTGAACACGTATGCAGATGACCAAGGCAACGTGGCCCCGGTAATAATGGGTGAACCGGAATTCAATCAATCCCTAAGAGAAGTGCATGTGACCTCCAAAATTGCTCCTGTAAAACCATTGGAGGTTGGAAGCGTGATCTGGGGCAAAGTGGCACTGGTGAAAGAGAATGCAGTTATCATTACTCTTTTGCATGCAGAAAAGGACGGGGAACCGCGCAAATTTGGCGGTTTAAATGGAACGCTCATGGTTTCGCGCGTGAGCAGGGAATTTGTCAAGGATTTGGGCGATTACTTTCGCACAGGGGACTTGGTTAAAGCCAAGGTCATGCAACTCACAGCGTATGCCATTGAACTTTCTACAGACGCACATGATTTGGGGGTCATTAAAGGTTTTTGTGTTAAATGCCGGTCGCCTTTGCACTTGTTTGACAACAAACTCAAATGCACGAGTTGTGGAAACAATGAAACGCGCAAGGTTTCAAGCGAGTACGCGTTAAGGGTTTGA
PROTEIN sequence
Length: 202
LLFKGVLMEKQSSSAKTLVFPGQHLAVEEEFVGGLNTYADDQGNVAPVIMGEPEFNQSLREVHVTSKIAPVKPLEVGSVIWGKVALVKENAVIITLLHAEKDGEPRKFGGLNGTLMVSRVSREFVKDLGDYFRTGDLVKAKVMQLTAYAIELSTDAHDLGVIKGFCVKCRSPLHLFDNKLKCTSCGNNETRKVSSEYALRV*