ggKbase home page

S36_SO-2_scaffold_479114_55

Organism: Genasci_Feb2018_S36_SO-2_Woesearchaeota_48_19

near complete RP 31 / 55 MC: 2 BSCG 22 / 51 MC: 1 ASCG 35 / 38 MC: 2
Location: comp(42876..43646)

Top 3 Functional Annotations

Value Algorithm Source
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 251.0
  • Bit_score: 305
  • Evalue 2.80e-80
Ribosomal RNA-processing protein RRP42 similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 244.0
  • Bit_score: 256
  • Evalue 7.10e-66
Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 256.0
  • Bit_score: 312
  • Evalue 4.10e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 771
ATGAACGAGCTTTTGAAGGCCAACATTTTGAAGTGGTTTGGCAAGGGTAAGCGTTATGATGGCCGCGGCCTGGATGAGTTCAGGGCTGTTGTCATAGAGCAAGGTGTTACCAAGAACGCTGAGGGCTCTGCCCGCGTCAAGGTGGGTGATACTGAGGTTATTGCCGGCGTTAAGCTTTCTGTTGAGAAGCCTTACCCTGACACTCCAAAGGATGGCAACCTGCTTGTTAATGTTGAACTTCTTCCGCTTTCCAGCCCTGACTTCGAGGCCGGTCCTCCGGGTGAGGAGGCCATTGAGGTTGCAAGGGTTGTTGACAGGGGCTTGCGGGAGTCCAAGGCCATTGACATCAGGAAGCTTTGCGTTCAGGAAGGTGAGAAGGTGTGGGCTGTGAGCATTGATATCTGCACGATTAACGCAGCCGGCAACCTGCTTGATGCCTCTGCCCTGGCTGCTGTTGCTGCGCTCAAGAACGCTCGTTTCCCAGAATACGATGGCAAGACTGTTGATTACAAGAGCATGACTGACAAGAAGCTTCCTATAGCGAGGTTTCCCGTGTCTGTTACTGTTACGAAGATTGGGGATTCCATTTTTGTTGACCCGACTGTTGAGGAGGAGAAGGTTGTTGACTCCAGGCTTACTGTTGCCATTACTGATGGCGGTAGAATCTGTGCCATGCAGAAGGGCGGGAACTCGCCTCTGTCAATTGATGAAATTGGCAGGATGATTGACCTTGCTGTAGCAAAGGCAGCTGAGCTTTCAAAACAGCTTTAG
PROTEIN sequence
Length: 257
MNELLKANILKWFGKGKRYDGRGLDEFRAVVIEQGVTKNAEGSARVKVGDTEVIAGVKLSVEKPYPDTPKDGNLLVNVELLPLSSPDFEAGPPGEEAIEVARVVDRGLRESKAIDIRKLCVQEGEKVWAVSIDICTINAAGNLLDASALAAVAALKNARFPEYDGKTVDYKSMTDKKLPIARFPVSVTVTKIGDSIFVDPTVEEEKVVDSRLTVAITDGGRICAMQKGGNSPLSIDEIGRMIDLAVAKAAELSKQL*