ggKbase home page

rifoxya1_full_scaffold_2473_9

Organism: RIFOXYA1_FULL_Pacearchaeota_34_166

partial RP 34 / 55 MC: 2 BSCG 18 / 51 MC: 1 ASCG 28 / 38 MC: 4
Location: comp(4255..4728)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6P {ECO:0000313|EMBL:AJS11564.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;" UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 158.0
  • Bit_score: 213
  • Evalue 2.10e-52
rpl6p; 50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 alias=gwa2_scaffold_32_381 id=5040249 tax=GW2011_AR20 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota organism_desc=DELETE: see complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 155.0
  • Bit_score: 165
  • Evalue 3.50e-38
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 155.0
  • Bit_score: 164
  • Evalue 2.30e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured archaeon → Archaea

Sequences

DNA sequence
Length: 474
TTGACAATTAAAGGTCCTCAAGGTGAATTGAAAAAAAGATTTAATGTGGCTCGATTGAGTTTTGAAAAGAAAGGAAATAAACTTATTTTTGGAAATAAAAGATCTACCAAAGCAGAGAAAAAAATGATGAATTCAATTTTTGCACACATTAATAATATGATTAAAGGTGTTCAGGAAAAATTTGAATACACTTTAAAAATTTGTCATAGTCATTTTCCGTTTACAGTTGAGTTTAAAGGAAATCAGGCAATTGTTAAAAACTTTTTAGGAGAAAAAGTTCCTAGATCAGTGAGAATGCCGTCGGGAGTGGACATAAAAATGAATAAAGAGATAATTACCATAACTTCCGTAAATAAAGAACTTGCTGGGCAAGCTTCGGCAAATTTGGAAAAAGTTACTCGAATTACTGGAAGAGATAAAAGAATTTTCCAAGATGGAATTTATATCACAAATAAAGCGGGGAAGGAAATGTAA
PROTEIN sequence
Length: 158
LTIKGPQGELKKRFNVARLSFEKKGNKLIFGNKRSTKAEKKMMNSIFAHINNMIKGVQEKFEYTLKICHSHFPFTVEFKGNQAIVKNFLGEKVPRSVRMPSGVDIKMNKEIITITSVNKELAGQASANLEKVTRITGRDKRIFQDGIYITNKAGKEM*