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rifoxya1_full_scaffold_3141_10

Organism: RIFOXYA1_FULL_Pacearchaeota_34_166

partial RP 34 / 55 MC: 2 BSCG 18 / 51 MC: 1 ASCG 28 / 38 MC: 4
Location: comp(5236..5547)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;" UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 103.0
  • Bit_score: 140
  • Evalue 1.50e-30
DNA-directed RNA polymerase subunit n=2 Tax=Pyrobaculum RepID=A4WLS3_PYRAR similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 110.0
  • Bit_score: 94
  • Evalue 5.10e-17
transcription termination factor Tfs similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 110.0
  • Bit_score: 94
  • Evalue 1.40e-17

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Taxonomy

archaeon GW2011_AR1 → Archaea

Sequences

DNA sequence
Length: 312
ATGGAATTCTGCCCAAAATGCGGAGCCGTTCTAATACAAAAAATAAAAAACGCAGGTTGCCCAAGATGTAAATATTCTGCTAAAGGCAAATTAGATATCACATCCTCTGAAGAAATTAAAGAAAAAAAACCAGCGACACCAGTTGTAAAAGGAAAAGAAATTGATGTCAACCCAATCGTAAACGAAGACTGCATAAAATGCGAAAGCGACAAATGTTATTTCTGGGAAATCCAAACCCGAGCAAGCGACGAATCGCCAACAAAATTCTTCAAATGCGTAAAATGCGGACACACACGAAGAGAATATCGGTAA
PROTEIN sequence
Length: 104
MEFCPKCGAVLIQKIKNAGCPRCKYSAKGKLDITSSEEIKEKKPATPVVKGKEIDVNPIVNEDCIKCESDKCYFWEIQTRASDESPTKFFKCVKCGHTRREYR*