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SRVP18_trench_6_60cm_scaffold_18388_5

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(1748..2527)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 1.40e-98
Exosome complex component Rrp42 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RRP42_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 5.10e-98
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 259.0
  • Bit_score: 500
  • Evalue 1.10e-138

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Taxonomy

Sequences

DNA sequence
Length: 780
ATGAGTAATGAAATAATGTCTGAACTTCGGAAAGATTATATCTATAATCTCATGATCAAAGGGGAGAGAGAGGATGGGCGGAAATTTGACGAGTACAGGGAAATCACAATTGACACAAATGTCATTGAAAAGGCAGAAGGCTCCGCGCGTGTAAAACTGGGGGATACGCATCTGGTCGTAGGCGTTAAGATCCAGACGGGCACGCCTTTCCCGGACACACCGGACCAGGGAGTGATCATTACAAATCTCGAACTTATCCCTCTTGCTTCGCCTGTATTTGAATCAGGCCCGCCAAGGGAAGATGCCATAGAACTTGCCAGGGTAGTTGACAGGGGCATCCGTGAATCCGAATCCATTGACCTTTCCAAGCTGTGTATAACACCTGGTGAAAAAGTGTGGATGGTTTTCATTGACGTACATGTCCTTGATGATGGCGGGAATATTATGGATGCAGCATCGCTGGGCGCCATAGCCGCTCTTATGACCGCAAAATTACCTGCAAAGCGTTTTGATGTGGGAGAAGACACGCCTGTTCCCATGCGGGATGTGCCCGTAGCCGTAACGGCGGTTGAGATAGGAGGCACGATCATGCTTGACCCCTCACTGAATGAACAAAGCATCGCCGGAACAAAACTGACCGTTATTTCCAACCAGGACGGCGGCCTGTCAGGCATGCAAAAGAGCGGTGTTAATCCGCTTACAACTGAACAGATAAATTATATAGTTGATATTGCAATTGAGAAGGCAAAAGAATTAAGAGAAAAATTCCTGGAGATATAA
PROTEIN sequence
Length: 260
MSNEIMSELRKDYIYNLMIKGEREDGRKFDEYREITIDTNVIEKAEGSARVKLGDTHLVVGVKIQTGTPFPDTPDQGVIITNLELIPLASPVFESGPPREDAIELARVVDRGIRESESIDLSKLCITPGEKVWMVFIDVHVLDDGGNIMDAASLGAIAALMTAKLPAKRFDVGEDTPVPMRDVPVAVTAVEIGGTIMLDPSLNEQSIAGTKLTVISNQDGGLSGMQKSGVNPLTTEQINYIVDIAIEKAKELREKFLEI*