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SRVP18_trench_6_60cm_scaffold_19208_1

Organism: SRVP18_trench_6_60cm_Methanoperedens_41_6

near complete RP 22 / 55 MC: 3 BSCG 16 / 51 ASCG 31 / 38 MC: 1
Location: comp(97..3411)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 1105.0
  • Bit_score: 1905
  • Evalue 0.0
polA2; DNA polymerase II large subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 1160.0
  • Bit_score: 855
  • Evalue 1.50e-245
DNA polymerase II large subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4P3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 1158.0
  • Bit_score: 865
  • Evalue 3.90e-248

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 3315
AAAATTAAGACCATTCTTGAAGTTCTTCTTGTCCCTCACATAGTACGCGAGAAGCAGGTTCACATCGATGAACCACTTCCTTTGATGAGATGCCTTGGCCTTGATAGAACTCTTAAAAAGACCTGGACCAATCCGGGATCCAGTATTATGGAAACTGTGTCTAAAGTAAGCGGGATAACCATCCGGGCCCGCGCTCCTATCAGGATAGGAGGAAGGATGGGGCGCCCCGAGAAATCCGATAAGCGTGAAATGAAACCTGCGCCGCATGTGCTTTTTCCTATCGGGGAGGCTGGAGGAAGGAGACGTTCGCTCCAGAGTGCAAAGGAATATGTGGACGATGATGATGGAGACAATCGAAATAATGGCCAGAAGACAGGTTTATCCATACAGAAAGGAAAAGTGGGCACAATAAAAGTGCAGATAGGGGAGCGTCAATGTCCATCGTGCAAGATCAGGACATTCAAGAACAGGTGTACATGCGGGAAATACACCCTGCCATTTCTGAGATGCGAATCCTGCGGGATAGAAGTAAATAAGCCAATATGTCCAAAATGTAAGAAAGACACAACATCAGTCACTGAAATGGATATTGATTTTAAATCTGAAGTCCAGCTTGCACTTAATAATGTAGGGGAAAGGGATACTCTTGAAATAAAATGTGTGCTTGGCCTTACTTCAAAATACAAGACGCCTGAGCCTCTTGAAAAAGGGGCGCTGCGGGCAAAGCATGATGTTGTGATGTTCAAGGACGGGACTGTCAGGTATGACCTCTCGGACCTGCCCCTTACCCATATAAAACCCAAAGAACTGGGTGTATCGGTTTCCAAACTGAAAGAACTCGGTTATGTGAATGACACATATGGAAATCCGCTTATTGATGAAAACCAGGTACTTGAACTTAAAGTACAGGACATTGTTGTTTCAAAGGATTGTGGCGAATATCTTTTGAAGACCGCGAGATTTATCGATGATCTTTTAACGAGATATTATAAAGTTGAATCATATTATAATATCGATAAGATTGAAGATCTGATCGGGAAATTGGTGATCGGACTTGCTCCCCATACATCGGCAGGAGTGCTAGGGCGCCTGGTCGGGTTCACTACAGCCTCGGTAGGATACGCGCATCCCTTCTTCCATGCTGCAAAGCGGCGAAACTGTTTCCAGGGGGATGAAAAATTATTAGTTCAAAGAGGGGCTGGCTTTGAACTTTCAACGATCCGTGAACTTGTTGAAAGCAACCTTATCGTTAAAAACGAAAAAGATGATTTTGGAACAGAATACAAGAAAATAAATGGCCTGAAAACATTTGCTTTCAACATAAAAACAAAAAAATTCGAATTGGCAGATATAACCCATATTTCAAAACATATTGCTCCTGAAAAGCTGATCGAAATAAAAACCAAAAGTGGTAGAAAGATAGTGGTGACAAAGGAACATACTTTCCCGGATAGATCAGGAGAAAAAGTGAAGGCCTGGGACGCAGATGAATTATTGATCCCCTGGAACATTGAAAGACCACCTATCGAAGCTAAAGAGAATATCGACTTACTTTCAATAACAGACGCGCAAGATGTAATGATAAGGACAGAATGTAATGTTTTCGAGGAGGACGTACAATTTTCACAGATAAGCAACGATCTTGGGATGAATTATAAAACATTTACTAATTACATTTACAGAAAATCATATCCTTTAGATATAGTCAATAGATTCAATCCTGAGGTGATCGATACAGGAAATTACTTATTAGGGAGCAAAAGAGACAAAGTTTCTATAAAGCCAAGCATAACGGTGAACGAAGATTTCTTATCACTGTTAGGATTTTATTTAGCAGAAGGGTTTATTAAAAAGGATCAAAATAATTGTCATCAGGTATCTATAACCGCTAATAAAGAATGGGCCAGACGCATATTAAAAGAAAAAATAAATGCCGTTTTTGGTTTGTCTCCCACTATTTCAGGAAACCATGTAACGATATGCTCAAGATTTGTCCTTGAACTTTTCGAATATCTGAAGATTGGCAAAGATGCCAAAACAAAAAGGATTCCGAACTTTGTGTACGCCCTGCCAAAGGATAAGATTAGTGCATTTTTGAAAGGTTATTTCACCGGAGATGGCTCGTGTTCCCTGCAGAGCACTTTAGAGGTCAATGTAACCTCAGTAAATAAATGGCTTATAGACGGGGTGTCTTTTCTCTTGATGTTTTCCGGGATCAAGCACTCTATTTATGAGGAAGAACGGGCAGTAAAAAGTGACCTCATTCTAAAATTCTATGGAAAACCGAAATTGATCCATTCTTATAAAATAAGGATATATGGCAGCGAAGCAAGAAAATTCATAGAAGACATAGGTTTTCTTGATAAAAAACAGAAGCATGCTGAAGAATTGCTTAAAAAATGGCTGGCTAAAGAAGGTCGGACAAGAACCAATTTTGATGAAGATGTTTTCATTGATAAAGTCGTAGAAAAAAAAGAAATAACCTCCCAGGATAAATATGTGTATAATCTGACAGTTGATACCCATCACAGCCTCATTTGCTCAGGAATTACCACATTCCAGTGCGACGGTGACGAGGACTGCGTTATGCTGCTGATGGACGGCCTCCTGAACTTCTCGCGCTCGTACCTTCCCGACAGGCGCGGCGGCCAGATGGACGCGCCTCTGGTTCTGACTTCGCGCATCGATCCCAATGAGGTGGATAAGGAAGCGCATAATGTGGATGTGCTTTTCCAGTACCCACTTGCGTTCTATGAAGCCACGCTCAAATATACGAATCCCAAAGATGTCGTCAAACTCATGGATACCGTGAGCGGAAGGCTTGGAACTCCGGCGCAGTACGAAGGATTCGGATTCACCCATGATACTACAAATATAGCAGCGGGTCCGAGGAACAGCGCGTATAAGACGCTCGGGACCATGATCGAAAAAATGGATGCACAGCTGGGGCTTGCCAGGAAAATTAAAGCTGTTGACCCCCAGGATGTAGCTGAGAGGGTAATAAATTCTCATTTCCTCCCCGACCTTATCGGGAACCTGCGCTCGTTCTCAAAGCAGAAGGTAAGATGCACGAAATGCAATGCCAAATACAGGCGCCCGCCGCTTCGTGGTACATGCCCCAGGTGCGGAGGGAATATCGTGCTGACGGTGCATGAGGGCTCGGTGAGGAAGTATCTAGAGACGAGCCTTCGGATAGCGGATGAGTATAATGTGAGGCATTACACGAAGCAGAGGCTTGAGCTGCTTGAGATCGAGATGAGGTCGCTGTTTGAGAGCGATAAGGTGAAGCAGAAGGGGCTTGCGGATTTTATGTAG
PROTEIN sequence
Length: 1105
KIKTILEVLLVPHIVREKQVHIDEPLPLMRCLGLDRTLKKTWTNPGSSIMETVSKVSGITIRARAPIRIGGRMGRPEKSDKREMKPAPHVLFPIGEAGGRRRSLQSAKEYVDDDDGDNRNNGQKTGLSIQKGKVGTIKVQIGERQCPSCKIRTFKNRCTCGKYTLPFLRCESCGIEVNKPICPKCKKDTTSVTEMDIDFKSEVQLALNNVGERDTLEIKCVLGLTSKYKTPEPLEKGALRAKHDVVMFKDGTVRYDLSDLPLTHIKPKELGVSVSKLKELGYVNDTYGNPLIDENQVLELKVQDIVVSKDCGEYLLKTARFIDDLLTRYYKVESYYNIDKIEDLIGKLVIGLAPHTSAGVLGRLVGFTTASVGYAHPFFHAAKRRNCFQGDEKLLVQRGAGFELSTIRELVESNLIVKNEKDDFGTEYKKINGLKTFAFNIKTKKFELADITHISKHIAPEKLIEIKTKSGRKIVVTKEHTFPDRSGEKVKAWDADELLIPWNIERPPIEAKENIDLLSITDAQDVMIRTECNVFEEDVQFSQISNDLGMNYKTFTNYIYRKSYPLDIVNRFNPEVIDTGNYLLGSKRDKVSIKPSITVNEDFLSLLGFYLAEGFIKKDQNNCHQVSITANKEWARRILKEKINAVFGLSPTISGNHVTICSRFVLELFEYLKIGKDAKTKRIPNFVYALPKDKISAFLKGYFTGDGSCSLQSTLEVNVTSVNKWLIDGVSFLLMFSGIKHSIYEEERAVKSDLILKFYGKPKLIHSYKIRIYGSEARKFIEDIGFLDKKQKHAEELLKKWLAKEGRTRTNFDEDVFIDKVVEKKEITSQDKYVYNLTVDTHHSLICSGITTFQCDGDEDCVMLLMDGLLNFSRSYLPDRRGGQMDAPLVLTSRIDPNEVDKEAHNVDVLFQYPLAFYEATLKYTNPKDVVKLMDTVSGRLGTPAQYEGFGFTHDTTNIAAGPRNSAYKTLGTMIEKMDAQLGLARKIKAVDPQDVAERVINSHFLPDLIGNLRSFSKQKVRCTKCNAKYRRPPLRGTCPRCGGNIVLTVHEGSVRKYLETSLRIADEYNVRHYTKQRLELLEIEMRSLFESDKVKQKGLADFM*