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SR-VP_26_10_2019_2_100cm_scaffold_11006_8

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(4195..4980)

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 1.90e-98
Exosome complex component Rrp42 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RRP42_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 6.70e-98
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 259.0
  • Bit_score: 468
  • Evalue 4.60e-129

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Taxonomy

Sequences

DNA sequence
Length: 786
ATGCCATTGAGTAATGAGATAATGGCAGAACTTCGTAAAGATTATATCTACAATCTTATGATTAAAGGCGAGCGGGAAGACGGCAGGACATTTGACCAGTACAGGGACATCACGATAGATACCAATGTGATAGAAAAAGCTGAAGGGTCAGCCCGCGTGAGACTCGGGGATACACTTCTGGTAGTCGGCGTGAAAATCCAGCCAGGGACTCCATTCCCTGACACACCAGACCAGGGAGTAATCATTACCAATCTTGAACTTATCCCGCTGGCTTCACCGGTATTCGAATCAGGCCCACCACGGGAGGATGCCATAGAACTTGCAAGGGTTGTGGACAGGGGCATTCGCGAGTCGGGTGCTATTGACCTCTCCAAATTGTGCGTAACCCCTGGTGAGAAGGTATGGATGGTTTTCATTGATGTGCATGTGCTGGACGACGGCGGGAACATAATGGATGCTGCTTCCCTCGGTGCGATTGCAGCCCTCATGACCGCGAAACTGCCGGCAAAACGTTTCGACCTCGGTGAAGATACGCCCGTGCCAATCAGGGATGTGCCTGTTGCTGTCACGGCTGTCGAGGTCGGCGGTTCAATAATGCTTGACCCGTCGCTGAACGAGGAAAGCATAGCAGGAACGAAGCTGACCGTCATATCCAACCAGGATGGTTGCTTATCAGGTATGCAGAAGAGCGGTGTTCACCCGCTTACTACCGAACAGATAAATTATATAGTGGATAATGCAATTGAGAAGGCAAAAGAGCTAAGACAAAAATTCCTGGAGATATAA
PROTEIN sequence
Length: 262
MPLSNEIMAELRKDYIYNLMIKGEREDGRTFDQYRDITIDTNVIEKAEGSARVRLGDTLLVVGVKIQPGTPFPDTPDQGVIITNLELIPLASPVFESGPPREDAIELARVVDRGIRESGAIDLSKLCVTPGEKVWMVFIDVHVLDDGGNIMDAASLGAIAALMTAKLPAKRFDLGEDTPVPIRDVPVAVTAVEVGGSIMLDPSLNEESIAGTKLTVISNQDGCLSGMQKSGVHPLTTEQINYIVDNAIEKAKELRQKFLEI*