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SR-VP_26_10_2019_C_40cm_scaffold_63_119

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(102583..103893)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 426.0
  • Bit_score: 786
  • Evalue 1.30e-224
Phosphomethylpyrimidine synthase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C003_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 427.0
  • Bit_score: 673
  • Evalue 1.10e-190
thiC; thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 427.0
  • Bit_score: 673
  • Evalue 3.20e-191

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1311
GTGAATCCTTCCAAAAGCCCGGTAATATTCATGAGTCTCATAGCAGAAGCAAAAAAAGGCAATCTGACACAGGAAATGAAACTGGTGGCAAAGGATGAAGCCGTAGAGCCAGAATTCGTACGGCGCGGAATAGAGAGCGGACGCATAGTGATTCCGGTGAGCCCCTATCGCCACACAAAGCCGTGCGGCATAGGCAAAGGGCTTCGCACAAAGGTGAACGCATCCATAGGAACTTCATCAGATATCGTGGATATTGAAATGGAGATAGAAAAAGCAAAGGTCGCAGAAGCAACAGGCGCAGATACGCTCATGGAGCTTTCAACAGGAGGAGATCTTTATGATATCAGGAAAAAGGTTATCGAATCCACCGCCCTCTCGGTGGGCAGTGTGCCGCTCTACCAGGCTTTCATTGAAGCCATCCGCAAATACGGCGCAGTCGTTGACATGAAAGAAGACGAGCTCTTCAATATTACAGCCGAGCAGGCAAAACTCGGGACGAATTTCATGGCGATACATACAGGGATAAACCTGTTCACCGTGGAGCGCCTGAAAAAACAGGGACGATTCGGTGGTCTCTGCTCCCGCGGAGGAGCTTTCATGACCGCCTGGATGCTTCATAACGAGAAAGAGAATCCGCTCTACAGCGAGTTCGATTACCTGCTTGAGATAATGAAAGAGCATGAGGTCACATTGAGCATGGGAAACGGTATGCGCGCAGGAGCGATACACGATTCCACGGACAGGGCGCAGATACAGGAACTTATTATGAACTCGGAGTTATCAGACAAAGCCCACGATGCTGGCGTGCAGACCATTGTTGAAGGTCCGGGCCACATCCCGATAGATGAGATCGATGCTAACGTAAAGCTCATGAAGCGATTGAGCGGGGATAAGCCATTCTACATGCTGGGGCCACTGGTCACGGATATCGCGCCGGGCTATGACCACATCGTTGCTGCCATCGGTGCATCTCTCTCAAGCGCAGCAGGCGCCGATTTCATCTGCTATGTGACGCCCGCAGAGCACCTCGCGCTCCCCAATATCGATGATGTAAGGCAGGGTGTCATAACCGCAAGGATAGCCGCACATATAGGCGATATGGTGAAGAATAACGACAGGCAGAGGGACCTTGATATGGGACGCGCCAGGCGGGATCTTAAGTGGGAGAGGATGTACGAACTTGCGATCGACCCCGAACATGCGAGATCCGTGAGGAACAGCCGCTCGCCTGAGGATGATGAAGCATGCACAATGTGCGGGAATTACTGTGCGCTCAAGATTGTGAAGCAGAATTTCAATTTTGAGCGATAG
PROTEIN sequence
Length: 437
VNPSKSPVIFMSLIAEAKKGNLTQEMKLVAKDEAVEPEFVRRGIESGRIVIPVSPYRHTKPCGIGKGLRTKVNASIGTSSDIVDIEMEIEKAKVAEATGADTLMELSTGGDLYDIRKKVIESTALSVGSVPLYQAFIEAIRKYGAVVDMKEDELFNITAEQAKLGTNFMAIHTGINLFTVERLKKQGRFGGLCSRGGAFMTAWMLHNEKENPLYSEFDYLLEIMKEHEVTLSMGNGMRAGAIHDSTDRAQIQELIMNSELSDKAHDAGVQTIVEGPGHIPIDEIDANVKLMKRLSGDKPFYMLGPLVTDIAPGYDHIVAAIGASLSSAAGADFICYVTPAEHLALPNIDDVRQGVITARIAAHIGDMVKNNDRQRDLDMGRARRDLKWERMYELAIDPEHARSVRNSRSPEDDEACTMCGNYCALKIVKQNFNFER*