ggKbase home page

S10_scaffold_1793_curated_2

Organism: S10_Methanosarcina_barkeri_39_9_curated

near complete RP 31 / 55 MC: 5 BSCG 21 / 51 ASCG 34 / 38 MC: 2
Location: comp(3604..4272)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 222.0
  • Bit_score: 423
  • Evalue 1.10e-115
Triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 222.0
  • Bit_score: 416
  • Evalue 2.70e-114
Triosephosphate isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=TPIS_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 222.0
  • Bit_score: 409
  • Evalue 1.50e-111
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 669
TTGGGTTTACCATTCATTGTATTGAACTATAAGACTTATTTACAGGGTACAGGTCAGGGAGCAGTGGAAATTGCAAAGGCCTGTAAAGCCGTATCCGAAGAGTCAGGTATCGAGATAGCAGTAGCCCCGCAGCTTCCGGACATTTATAGGGTAGCCTCGGAAGTTGAACTGCCGGTTTTTTCCCAGCATCTGGATGGGATAGGAGCAGGAAGTTTTACAGGCCATATTTTCGGAAAATCCATAAAAGATGCAGGCGCTGTAGGGACTCTGATCAACCACTCTGAGAAGCGTCTAACCCTTGCAGAAATCGAGGCGTCGCTAAAAGCTGCAAAAAAATTCGGGCTCAGGTCAATTATCTGCACTAATAATGTCCCGACAACTGCAGCAGCTGCAGCCCTGGGTCCGGATTATGTTGCAATCGAGCCCCCAGAACTTATAGGGAGCGGAATCCCTGTCTCAAAAGCCGATCCTGAAATTGTTAGCGGTTCGGTTGAGGCGGTTGCGAAAATTAATTCCCAGGTAAAGGTACTCTGCGGAGCTGGGATTTCCAAAGGTGAAGATCTAAGGGCAGCTCTTGACCTTGGTTCTCAAGGCGTGCTTCTGGCGTCTGGAATTGTAAAAGCTGCAGACCCAAAAGCCGCACTCGAAGATCTCATACGTCTGGTTTAA
PROTEIN sequence
Length: 223
LGLPFIVLNYKTYLQGTGQGAVEIAKACKAVSEESGIEIAVAPQLPDIYRVASEVELPVFSQHLDGIGAGSFTGHIFGKSIKDAGAVGTLINHSEKRLTLAEIEASLKAAKKFGLRSIICTNNVPTTAAAAALGPDYVAIEPPELIGSGIPVSKADPEIVSGSVEAVAKINSQVKVLCGAGISKGEDLRAALDLGSQGVLLASGIVKAADPKAALEDLIRLV*