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S28_scaffold_7421_curated_1

Organism: S28_Methanosarcina_42_8_curated

near complete RP 33 / 55 MC: 6 BSCG 23 / 51 MC: 3 ASCG 36 / 38 MC: 1
Location: comp(2..736)

Top 3 Functional Annotations

Value Algorithm Source
Protein-export membrane protein SecD n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUC9_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 245.0
  • Bit_score: 406
  • Evalue 1.90e-110
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKG11511.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 245.0
  • Bit_score: 425
  • Evalue 4.20e-116
secD; preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 245.0
  • Bit_score: 406
  • Evalue 5.30e-111

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Taxonomy

Methanosarcina sp. 2.H.A.1B.4 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 735
ATGAGCGATAAAAAAAGCCTCTTTAAAAATGTAAGAGTTATCATCTTCATACTTGCCCTGCTCGCCTCGATCGTGCTTATCCAGCCAGGTTATACTTCAGGAGAGGGGGTTACCACTAACCTGAATTACGGGCTTGACCTTGAAGGTGGTTCCTGGCTTCAGATCAAACTACAGGGAGCTCTCGTCCAGGTAGATGCAGACCCTGGAATGATAGTAAGTCAAATGGTAGAACCTGTCATCGGCGCTCCTATCCAGATCACAAGTAACAACCTGGAAGCCAGTGGAGTGAGTTCATCCAAAAGATCCATCACGTTCACAACATCTGTTCCGGTTAGCGCAACCCAACTTGAGCTTATGGAGCTTGGCACTGTAAGCGTTGATAGGTTGAACCAGAACACGACCCAGGTAACTCTAACTACCAGTAAAGAATCCCTTATCCAGGCTTACCTATCACAGGCCTTTGATGCAGAAGTACTTCCTTTCAGTACTGACGATGGTATTGTCTATGAGATAAGGACTGAAGCCTCAGAAGAAGAGCTTGAAGCCCTTATGGAAAAGGTCGGAGGTACAATCCTCAGAAATGAAGACGGGACCTCGACTTATCAAGAAGGAGTCAGCACCGACACAAGGGACCTGACCAGAGACATTCTGAATGACAAACTTAACTCACTTGGCTTGAAAGATATCCCTGTCAGGACTGTCGGAGAAGATTATATTCTCATTGATTTTGCAGGA
PROTEIN sequence
Length: 245
MSDKKSLFKNVRVIIFILALLASIVLIQPGYTSGEGVTTNLNYGLDLEGGSWLQIKLQGALVQVDADPGMIVSQMVEPVIGAPIQITSNNLEASGVSSSKRSITFTTSVPVSATQLELMELGTVSVDRLNQNTTQVTLTTSKESLIQAYLSQAFDAEVLPFSTDDGIVYEIRTEASEEELEALMEKVGGTILRNEDGTSTYQEGVSTDTRDLTRDILNDKLNSLGLKDIPVRTVGEDYILIDFAG