ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 551-600 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_581325 Species: Aciduliprofundum boonei (50%)	2	1016 bp	48.92	3.25	58.46
13_1_40cm_4_scaffold_307290 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1497 bp	64.33	6.61	58.52
13_1_40cm_4_scaffold_221804 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1953 bp	62.72	2.76	58.53
13_1_40cm_4_scaffold_320239 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1589 bp	70.86	2.45	58.53
13_1_40cm_4_scaffold_344629 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1389 bp	51.98	2.38	58.53
13_1_40cm_4_scaffold_226796 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1107 bp	65.85	24.80	58.54
13_1_40cm_4_scaffold_357565 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1132 bp	63.07	13.25	58.57
13_1_40cm_4_scaffold_515886 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1096 bp	62.86	13.81	58.58
13_1_40cm_4_scaffold_221893 Phylum: Euryarchaeota (50%)	6	3681 bp	55.75	11.15	58.60
13_1_40cm_4_scaffold_70057 Order: Methanosarcinales (50%)	4	3890 bp	61.41	3.51	58.61
13_1_40cm_4_scaffold_535405 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1090 bp	63.03	12.25	58.62
13_1_40cm_4_scaffold_218744 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	1	1136 bp	66.99	3.57	58.63
13_1_40cm_4_scaffold_112316 Phylum: Euryarchaeota (66.67%)	3	2405 bp	59.29	4.18	58.63
13_1_40cm_4_scaffold_418585 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1243 bp	61.38	12.07	58.65
13_1_40cm_4_scaffold_401694 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1221 bp	41.77	1.97	58.72
13_1_40cm_4_scaffold_244272 Species: Methanosarcina horonobensis (50%)	2	1501 bp	61.36	2.50	58.76
13_1_40cm_4_scaffold_142307 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1950 bp	62.46	5.54	58.77
13_1_40cm_4_scaffold_221927 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1631 bp	51.75	2.85	58.86
13_1_40cm_4_scaffold_191974 Species: Halogeometricum pallidum (50%)	2	1227 bp	52.16	6.72	58.92
13_1_40cm_4_scaffold_359958 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1277 bp	60.38	9.40	58.97
13_1_40cm_4_scaffold_178258 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1277 bp	60.45	10.22	58.97
13_1_40cm_4_scaffold_169271 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	3178 bp	64.51	3.07	59.00
13_1_40cm_4_scaffold_70420 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	2032 bp	62.45	3.17	59.06
13_1_40cm_4_scaffold_225355 Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (100%)	1	1112 bp	52.97	4.32	59.08
13_1_40cm_4_scaffold_567440 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1183 bp	59.00	2.41	59.09
13_1_40cm_4_scaffold_35885 Phylum: Euryarchaeota (50%)	4	2811 bp	57.35	11.10	59.12
13_1_40cm_4_scaffold_404960 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	1	1166 bp	64.41	28.51	59.18
13_1_40cm_4_scaffold_393282 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1054 bp	64.33	8.25	59.20
13_1_40cm_4_scaffold_412372 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	2335 bp	66.55	48.63	59.36
13_1_40cm_4_scaffold_425200 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1041 bp	61.58	17.78	59.37
13_1_40cm_4_scaffold_363233 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1455 bp	65.02	3.40	59.38
13_1_40cm_4_scaffold_537657 Species: Methanocella conradii (100%)	1	1055 bp	60.38	3.55	59.43
13_1_40cm_4_scaffold_16869 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	5261 bp	58.33	46.10	59.48
13_1_40cm_4_scaffold_303231 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1315 bp	57.49	11.42	59.54
13_1_40cm_4_scaffold_496549 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1657 bp	59.20	4.62	59.57
13_1_40cm_4_scaffold_229475 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	2294 bp	58.33	24.68	59.63
13_1_40cm_4_scaffold_160674 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1348 bp	49.48	5.79	59.64
13_1_40cm_4_scaffold_358231 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1916 bp	49.90	19.55	59.66
13_1_40cm_4_scaffold_159816 Phylum: Euryarchaeota (66.67%)	3	1352 bp	62.13	2.33	59.69
13_1_40cm_4_scaffold_200097 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1783 bp	63.21	5.22	59.73
13_1_40cm_4_scaffold_152235 Species: Methanosphaerula palustris (50%)	2	1386 bp	55.77	1.52	59.74
13_1_40cm_4_scaffold_235915 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1074 bp	65.36	5.31	59.78
13_1_40cm_4_scaffold_61333 Phylum: Euryarchaeota (50%)	6	4624 bp	65.87	2.85	59.82
13_1_40cm_4_scaffold_245831 Species: Thermococcus paralvinellae (50%)	2	1038 bp	51.83	2.60	59.83
13_1_40cm_4_scaffold_550974 Species: Thermoplasma acidophilum (50%)	2	1058 bp	51.04	2.69	59.83
13_1_40cm_4_scaffold_300656 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1208 bp	63.66	7.08	59.85
13_1_40cm_4_scaffold_247671 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1032 bp	52.81	3.05	59.88
13_1_40cm_4_scaffold_564946 Species: RBG_19FT_COMBO_Euryarchaeota_56_21_curated (50%)	2	1157 bp	63.01	2.20	59.90
13_1_40cm_4_scaffold_543900 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1046 bp	63.96	3.73	59.94
13_1_40cm_4_scaffold_456704 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1201 bp	60.78	3.37	59.95

Displaying items 551-600 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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