ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 11101-11150 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_244640 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1043 bp	69.61	8.77	100.38
13_1_40cm_4_scaffold_172420 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1300 bp	65.15	54.81	100.38
13_1_40cm_4_scaffold_150785 Phylum: Euryarchaeota (66.67%)	6	2340 bp	62.91	12.71	100.38
13_1_40cm_4_scaffold_247113 Species: Methanosphaerula palustris (50%)	2	1034 bp	56.48	1.89	100.39
13_1_40cm_4_scaffold_50290 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	2842 bp	65.02	41.35	100.39
13_1_40cm_4_scaffold_89093 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1808 bp	63.38	5.14	100.39
13_1_40cm_4_scaffold_176307 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1285 bp	66.46	8.40	100.39
13_1_40cm_4_scaffold_445177 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1016 bp	57.58	11.55	100.39
13_1_40cm_4_scaffold_142805 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	2020 bp	62.97	6.46	100.40
13_1_40cm_4_scaffold_73125 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	3	1996 bp	65.78	19.91	100.40
13_1_40cm_4_scaffold_38891 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	2704 bp	61.76	4.27	100.41
13_1_40cm_4_scaffold_20605 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	3642 bp	67.63	9.68	100.41
13_1_40cm_4_scaffold_102754 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1685 bp	61.48	9.08	100.42
13_1_40cm_4_scaffold_48116 Phylum: Euryarchaeota (50%)	4	3358 bp	62.81	9.64	100.42
13_1_40cm_4_scaffold_296400 Phylum: Euryarchaeota (66.67%)	3	1434 bp	63.53	2.20	100.42
13_1_40cm_4_scaffold_81534 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1891 bp	64.78	41.25	100.42
13_1_40cm_4_scaffold_147148 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1410 bp	62.77	6.06	100.43
13_1_40cm_4_scaffold_83108 Species: Thermococcus sibiricus (50%)	2	1873 bp	63.27	5.05	100.43
13_1_40cm_4_scaffold_150327 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1395 bp	72.54	5.16	100.43
13_1_40cm_4_scaffold_239655 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1810 bp	64.25	5.17	100.44
13_1_40cm_4_scaffold_122856 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	1544 bp	67.68	2.82	100.45
13_1_40cm_4_scaffold_228354 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1102 bp	62.98	25.59	100.45
13_1_40cm_4_scaffold_131557 Phylum: Euryarchaeota (66.67%)	3	1965 bp	68.75	3.36	100.46
13_1_40cm_4_scaffold_41724 Species: Aciduliprofundum sp. MAR08-339 (100%)	2	2616 bp	61.93	2.47	100.46
13_1_40cm_4_scaffold_282826 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1720 bp	62.97	2.97	100.47
13_1_40cm_4_scaffold_180295 Class: Halobacteria (66.67%)	3	1269 bp	70.84	4.02	100.47
13_1_40cm_4_scaffold_330280 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1263 bp	62.63	1.66	100.48
13_1_40cm_4_scaffold_371193 Species: Methanomassiliicoccus luminyensis (50%)	2	1042 bp	52.11	3.89	100.48
13_1_40cm_4_scaffold_338771 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1433 bp	62.81	8.79	100.49
13_1_40cm_4_scaffold_189872 Phylum: Euryarchaeota (100%)	3	1636 bp	66.14	50.52	100.49
13_1_40cm_4_scaffold_280843 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1221 bp	68.06	10.57	100.49
13_1_40cm_4_scaffold_197318 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1209 bp	62.94	26.92	100.50
13_1_40cm_4_scaffold_88938 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1809 bp	59.70	7.71	100.50
13_1_40cm_4_scaffold_101815 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	2203 bp	64.32	5.99	100.50
13_1_40cm_4_scaffold_119153 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1567 bp	53.61	4.88	100.51
13_1_40cm_4_scaffold_212392 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1158 bp	67.01	20.60	100.52
13_1_40cm_4_scaffold_212522 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1158 bp	65.37	3.37	100.52
13_1_40cm_4_scaffold_64930 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	2116 bp	66.82	4.40	100.52
13_1_40cm_4_scaffold_66572 Species: Methanosarcina mazei (66.67%)	3	2089 bp	52.18	1.87	100.53
13_1_40cm_4_scaffold_219330 Species: Candidatus Methanoperedens nitroreducens (50%)	2	1134 bp	65.43	5.56	100.53
13_1_40cm_4_scaffold_102209 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	1689 bp	68.44	2.31	100.53
13_1_40cm_4_scaffold_84932 Species: Methanosaeta harundinacea (50%)	2	2423 bp	76.76	2.85	100.54
13_1_40cm_4_scaffold_225063 Phylum: Euryarchaeota (75%)	4	1113 bp	64.69	58.63	100.54
13_1_40cm_4_scaffold_134900 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1474 bp	63.64	4.07	100.54
13_1_40cm_4_scaffold_242743 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1468 bp	68.60	6.58	100.55
13_1_40cm_4_scaffold_230060 Species: Geoglobus ahangari (50%)	2	1095 bp	52.97	10.00	100.55
13_1_40cm_4_scaffold_230090 Species: Geoglobus ahangari (50%)	2	1095 bp	52.69	2.88	100.55
13_1_40cm_4_scaffold_43911 Phylum: Euryarchaeota (66.67%)	6	2554 bp	65.43	25.49	100.55
13_1_40cm_4_scaffold_51565 Species: Thermoplasma volcanium (50%)	2	2366 bp	63.48	14.01	100.55
13_1_40cm_4_scaffold_180711 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1268 bp	64.83	2.84	100.55

Displaying items 11101-11150 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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