ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_4_UNK

Properties

Avg. coverage: 12.06 Longest contig: 43.14 Kbp Bin length: 27.61 Mbp GC content: 62.74 %

Contigs count: 11446 Features count: 36114 rRNAs count: 0 tRNAs count: 275

Genome completeness

megabin RP 34 / 55 MC: 33 BSCG 23 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 201-250 of 11446 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_4_scaffold_225238 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1113 bp	65.59	4.18	101.08
13_1_40cm_4_scaffold_243110 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	1579 bp	64.91	42.56	101.08
13_1_40cm_4_scaffold_97849 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	2532 bp	63.63	16.71	101.07
13_1_40cm_4_scaffold_215826 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1146 bp	66.75	1.57	101.05
13_1_40cm_4_scaffold_109889 Species: Thermoplasmatales archaeon I-plasma (66.67%)	3	1630 bp	61.72	2.94	101.04
13_1_40cm_4_scaffold_45884 Species: Candidatus Methanoperedens nitroreducens (50%)	4	3023 bp	55.67	2.73	101.03
13_1_40cm_4_scaffold_152558 Phylum: Euryarchaeota (66.67%)	3	1384 bp	66.84	44.65	101.01
13_1_40cm_4_scaffold_123293 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2177 bp	64.72	4.07	101.01
13_1_40cm_4_scaffold_237495 Phylum: Euryarchaeota (66.67%)	3	1491 bp	65.06	42.56	101.01
13_1_40cm_4_scaffold_169682 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1310 bp	66.03	3.09	100.99
13_1_40cm_4_scaffold_188274 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1839 bp	66.23	6.28	100.98
13_1_40cm_4_scaffold_192122 Species: Methanosaeta harundinacea (50%)	2	1227 bp	55.58	2.08	100.98
13_1_40cm_4_scaffold_403091 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1037 bp	62.87	25.89	100.96
13_1_40cm_4_scaffold_487767 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1147 bp	64.25	1.83	100.96
13_1_40cm_4_scaffold_367547 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1150 bp	67.91	14.81	100.96
13_1_40cm_4_scaffold_522915 Species: Thermoplasmatales archaeon Gpl (50%)	2	1046 bp	52.49	1.43	100.96
13_1_40cm_4_scaffold_236567 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	2202 bp	65.26	28.68	100.95
13_1_40cm_4_scaffold_242796 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1049 bp	53.00	9.01	100.95
13_1_40cm_4_scaffold_242874 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1049 bp	52.91	4.29	100.95
13_1_40cm_4_scaffold_180358 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1269 bp	70.92	4.85	100.95
13_1_40cm_4_scaffold_373797 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1599 bp	63.16	7.06	100.94
13_1_40cm_4_scaffold_278118 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	1495 bp	70.03	4.62	100.94
13_1_40cm_4_scaffold_397192 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1293 bp	61.33	45.13	100.93
13_1_40cm_4_scaffold_34141 Species: RBG_16_Euryarchaeota_68_12_curated (75%)	4	3448 bp	67.23	3.65	100.93
13_1_40cm_4_scaffold_74524 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1977 bp	69.45	6.83	100.91
13_1_40cm_4_scaffold_234107 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1766 bp	55.72	15.03	100.91
13_1_40cm_4_scaffold_165211 Species: Geoglobus acetivorans (50%)	2	1329 bp	52.52	5.76	100.90
13_1_40cm_4_scaffold_338666 Phylum: Euryarchaeota (100%)	3	1442 bp	64.63	11.13	100.90
13_1_40cm_4_scaffold_72268 Phylum: Euryarchaeota (66.67%)	3	2007 bp	43.00	2.02	100.90
13_1_40cm_4_scaffold_223864 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1118 bp	64.40	5.64	100.89
13_1_40cm_4_scaffold_190970 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1231 bp	65.23	2.07	100.89
13_1_40cm_4_scaffold_222860 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1121 bp	66.73	54.46	100.89
13_1_40cm_4_scaffold_222260 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	1124 bp	65.93	3.34	100.89
13_1_40cm_4_scaffold_117306 Phylum: Euryarchaeota (66.67%)	3	1579 bp	66.12	24.13	100.89
13_1_40cm_4_scaffold_133691 Species: BJP_IG2069_Methanobacteriales_33_27 (50%)	2	1481 bp	56.38	2.84	100.88
13_1_40cm_4_scaffold_246958 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1499 bp	68.18	3.90	100.87
13_1_40cm_4_scaffold_415610 Species: Altiarchaeum hamiconexum (50%)	2	1282 bp	53.20	2.22	100.86
13_1_40cm_4_scaffold_235936 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1074 bp	63.69	10.34	100.84
13_1_40cm_4_scaffold_168490 Species: Haloterrigena turkmenica (50%)	2	1315 bp	68.44	1.83	100.84
13_1_40cm_4_scaffold_41046 Phylum: Euryarchaeota (80%)	5	2636 bp	63.16	10.98	100.84
13_1_40cm_4_scaffold_39440 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	3359 bp	67.55	4.29	100.83
13_1_40cm_4_scaffold_140159 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1446 bp	65.91	12.86	100.83
13_1_40cm_4_scaffold_47391 Species: Methanosarcina siciliae (75%)	4	3026 bp	48.05	2.78	100.83
13_1_40cm_4_scaffold_253282 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1583 bp	59.44	19.33	100.82
13_1_40cm_4_scaffold_266328 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1586 bp	69.36	2.74	100.82
13_1_40cm_4_scaffold_232765 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	4	1833 bp	65.03	3.85	100.82
13_1_40cm_4_scaffold_42418 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	3104 bp	68.20	5.03	100.80
13_1_40cm_4_scaffold_187209 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1244 bp	65.11	10.37	100.80
13_1_40cm_4_scaffold_155843 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1369 bp	64.21	16.76	100.80
13_1_40cm_4_scaffold_183828 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1256 bp	59.47	16.60	100.80

Displaying items 201-250 of 11446 in total

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_4_Euryarchaeota_megabin_63_12

13_1_40CM_4_Euryarchaeota_63_12

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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