ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_3_UNK

Properties

Avg. coverage: 11.22 Longest contig: 27.37 Kbp Bin length: 26.64 Mbp GC content: 62.56 %

Contigs count: 13027 Features count: 36085 rRNAs count: 0 tRNAs count: 219

Genome completeness

megabin RP 34 / 55 MC: 31 BSCG 25 / 51 MC: 18 ASCG 38 / 38 MC: 38

Displaying items 451-500 of 13027 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_3_scaffold_84622 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	3	1991 bp	64.39	2.26	100.35
13_1_40cm_3_scaffold_266296 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1139 bp	66.90	12.64	100.35
13_1_40cm_3_scaffold_261019 Species: RBG_16_Euryarchaeota_41_19_curated (50%)	2	1151 bp	68.20	2.09	100.35
13_1_40cm_3_scaffold_84627 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	4081 bp	66.06	4.04	100.34
13_1_40cm_3_scaffold_80122 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	3	2042 bp	62.05	24.39	100.34
13_1_40cm_3_scaffold_253345 Species: Methanocaldococcus fervens (50%)	2	1169 bp	58.85	2.69	100.34
13_1_40cm_3_scaffold_253608 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1169 bp	61.76	15.53	100.34
13_1_40cm_3_scaffold_251926 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1172 bp	66.55	34.81	100.34
13_1_40cm_3_scaffold_250986 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1175 bp	69.19	3.45	100.34
13_1_40cm_3_scaffold_249674 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1178 bp	64.86	1.78	100.34
13_1_40cm_3_scaffold_44735 Species: Ferroplasma acidarmanus (100%)	2	2655 bp	57.02	2.60	100.34
13_1_40cm_3_scaffold_454754 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1184 bp	68.67	44.85	100.34
13_1_40cm_3_scaffold_244539 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1190 bp	67.48	1.39	100.34
13_1_40cm_3_scaffold_243387 Phylum: Euryarchaeota (66.67%)	3	1193 bp	65.63	8.42	100.34
13_1_40cm_3_scaffold_242207 Species: RBG_16_Euryarchaeota_67_27_curated (75%)	4	1196 bp	62.63	10.79	100.33
13_1_40cm_3_scaffold_239741 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1202 bp	65.06	1.50	100.33
13_1_40cm_3_scaffold_239547 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1202 bp	66.64	1.25	100.33
13_1_40cm_3_scaffold_499290 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1208 bp	50.99	8.32	100.33
13_1_40cm_3_scaffold_237480 Species: Methanothermus fervidus (50%)	2	1208 bp	57.53	3.48	100.33
13_1_40cm_3_scaffold_232523 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1220 bp	70.74	2.83	100.33
13_1_40cm_3_scaffold_228302 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1232 bp	65.26	13.64	100.33
13_1_40cm_3_scaffold_164305 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	2476 bp	68.42	1.70	100.32
13_1_40cm_3_scaffold_237454 Phylum: Euryarchaeota (75%)	4	1866 bp	62.49	19.21	100.32
13_1_40cm_3_scaffold_222671 Species: Methanosarcina mazei (50%)	2	1247 bp	55.25	2.77	100.32
13_1_40cm_3_scaffold_138934 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1573 bp	59.31	2.96	100.32
13_1_40cm_3_scaffold_138347 Phylum: Euryarchaeota (100%)	3	1576 bp	65.67	2.76	100.32
13_1_40cm_3_scaffold_427773 Species: RBG_16_Euryarchaeota_68_13_curated (100%)	2	1265 bp	63.56	10.20	100.32
13_1_40cm_3_scaffold_216535 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1265 bp	66.80	1.78	100.32
13_1_40cm_3_scaffold_216601 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1265 bp	65.22	18.50	100.32
13_1_40cm_3_scaffold_215614 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1268 bp	63.96	3.31	100.32
13_1_40cm_3_scaffold_133619 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1603 bp	66.75	16.94	100.31
13_1_40cm_3_scaffold_205742 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1298 bp	65.87	2.31	100.31
13_1_40cm_3_scaffold_62710 Phylum: Euryarchaeota (66.67%)	3	2285 bp	65.12	6.63	100.31
13_1_40cm_3_scaffold_127994 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1636 bp	65.71	11.83	100.31
13_1_40cm_3_scaffold_27449 Class: Halobacteria (66.67%)	3	3278 bp	66.50	4.76	100.31
13_1_40cm_3_scaffold_86029 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	1977 bp	64.90	1.82	100.30
13_1_40cm_3_scaffold_314679 Phylum: Euryarchaeota (50%)	4	1986 bp	63.29	15.71	100.30
13_1_40cm_3_scaffold_196787 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1328 bp	67.70	1.58	100.30
13_1_40cm_3_scaffold_103532 Species: Halogranum salarium (66.67%)	3	2357 bp	67.88	4.26	100.30
13_1_40cm_3_scaffold_189876 Species: RBG_16_Euryarchaeota_67_27_curated (100%)	2	1352 bp	64.94	1.89	100.30
13_1_40cm_3_scaffold_314700 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1014 bp	67.65	16.27	100.30
13_1_40cm_3_scaffold_313725 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1017 bp	66.57	43.07	100.30
13_1_40cm_3_scaffold_313517 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1017 bp	64.60	26.55	100.30
13_1_40cm_3_scaffold_313756 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1017 bp	68.04	2.06	100.30
13_1_40cm_3_scaffold_313578 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1017 bp	66.27	20.80	100.30
13_1_40cm_3_scaffold_32090 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	3066 bp	65.56	40.66	100.29
13_1_40cm_3_scaffold_311429 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1023 bp	67.94	13.78	100.29
13_1_40cm_3_scaffold_311443 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1023 bp	69.31	2.05	100.29
13_1_40cm_3_scaffold_116076 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	1714 bp	65.29	2.54	100.29
13_1_40cm_3_scaffold_596578 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1029 bp	63.17	2.77	100.29

Displaying items 451-500 of 13027 in total

13_1_40CM_3_Euryarchaeota_megabin_63_11

13_1_40CM_3_Euryarchaeota_63_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_3_Euryarchaeota_megabin_63_11

13_1_40CM_3_Euryarchaeota_63_11

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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