ggKbase | organisms

Consensus taxonomy: Euryarchaeota → Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: 13_1_40cm_UNK

Properties

Avg. coverage: 20.00 Longest contig: 23.13 Kbp Bin length: 22.48 Mbp GC content: 62.57 %

Contigs count: 10569 Features count: 30185 rRNAs count: 0 tRNAs count: 180

Genome completeness

megabin RP 35 / 55 MC: 32 BSCG 23 / 51 MC: 20 ASCG 38 / 38 MC: 38

Displaying items 251-300 of 10569 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
13_1_40cm_scaffold_131711 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	2	1434 bp	70.71	7.00	100.84
13_1_40cm_scaffold_105264 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1613 bp	67.39	17.27	100.81
13_1_40cm_scaffold_103064 Species: RBG_16_Euryarchaeota_68_13_curated (66.67%)	3	1631 bp	59.10	19.54	100.80
13_1_40cm_scaffold_139968 Phylum: Euryarchaeota (66.67%)	3	1387 bp	70.66	8.32	100.79
13_1_40cm_scaffold_36787 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	4	2691 bp	64.44	54.94	100.78
13_1_40cm_scaffold_185638 Species: RBG_16_Euryarchaeota_67_27_curated (75%)	4	1938 bp	60.32	58.41	100.77
13_1_40cm_scaffold_188341 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1164 bp	67.18	49.38	100.77
13_1_40cm_scaffold_131007 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1438 bp	52.23	21.47	100.76
13_1_40cm_scaffold_130053 Species: Thermoplasmatales archaeon I-plasma (50%)	2	1444 bp	52.22	11.30	100.76
13_1_40cm_scaffold_151319 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1328 bp	67.09	23.81	100.75
13_1_40cm_scaffold_53028 Species: RBG_16_Euryarchaeota_68_12_curated (100%)	3	2260 bp	67.70	9.44	100.75
13_1_40cm_scaffold_209358 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1078 bp	50.74	16.30	100.74
13_1_40cm_scaffold_66314 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	2031 bp	65.93	10.38	100.74
13_1_40cm_scaffold_23387 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	4	3315 bp	62.62	11.13	100.72
13_1_40cm_scaffold_99252 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1662 bp	70.82	3.62	100.72
13_1_40cm_scaffold_165537 Species: Thermococcus litoralis (50%)	2	1260 bp	52.14	3.19	100.71
13_1_40cm_scaffold_245379 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1540 bp	53.77	21.03	100.71
13_1_40cm_scaffold_269647 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1412 bp	63.31	15.47	100.71
13_1_40cm_scaffold_68738 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1996 bp	64.28	86.27	100.70
13_1_40cm_scaffold_21586 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	3435 bp	62.94	20.97	100.70
13_1_40cm_scaffold_77546 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	4	1882 bp	67.38	7.07	100.69
13_1_40cm_scaffold_214111 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	2041 bp	67.66	7.13	100.69
13_1_40cm_scaffold_76638 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (75%)	4	2491 bp	61.90	18.94	100.68
13_1_40cm_scaffold_103950 Species: RBG_16_Euryarchaeota_68_12_curated (50%)	2	1624 bp	69.77	6.03	100.68
13_1_40cm_scaffold_102826 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	2	1633 bp	52.42	10.91	100.67
13_1_40cm_scaffold_121806 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	1496 bp	64.57	14.76	100.67
13_1_40cm_scaffold_217114 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1049 bp	61.96	20.82	100.67
13_1_40cm_scaffold_177320 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1210 bp	65.45	13.69	100.66
13_1_40cm_scaffold_212296 Species: RBG_16_Euryarchaeota_67_27_curated (66.67%)	3	1067 bp	63.64	25.17	100.66
13_1_40cm_scaffold_69501 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (75%)	4	1985 bp	63.93	24.78	100.66
13_1_40cm_scaffold_69269 Species: Haloquadratum walsbyi (50%)	2	1988 bp	55.58	4.42	100.65
13_1_40cm_scaffold_210022 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1076 bp	64.78	80.48	100.65
13_1_40cm_scaffold_209187 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1079 bp	65.62	77.70	100.65
13_1_40cm_scaffold_251579 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	1240 bp	65.81	10.12	100.65
13_1_40cm_scaffold_136965 Species: Methanobacterium lacus (50%)	2	1404 bp	59.90	3.22	100.64
13_1_40cm_scaffold_168189 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1249 bp	66.05	13.87	100.64
13_1_40cm_scaffold_204580 Species: RBG_16_Euryarchaeota_68_13_curated (50%)	2	1097 bp	64.08	8.92	100.64
13_1_40cm_scaffold_135330 Phylum: Euryarchaeota (66.67%)	3	1413 bp	65.25	4.44	100.64
13_1_40cm_scaffold_135388 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (100%)	3	1413 bp	71.48	36.77	100.64
13_1_40cm_scaffold_124083 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	4	2528 bp	65.82	26.11	100.63
13_1_40cm_scaffold_164209 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	2057 bp	65.82	50.52	100.63
13_1_40cm_scaffold_200150 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1115 bp	61.26	42.32	100.63
13_1_40cm_scaffold_41281 Species: Candidatus Methanoperedens nitroreducens (50%)	2	2549 bp	70.66	16.64	100.63
13_1_40cm_scaffold_52080 Species: RBG_16_Euryarchaeota_68_12_curated (66.67%)	3	3223 bp	65.13	23.75	100.62
13_1_40cm_scaffold_195127 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (50%)	2	1136 bp	54.84	5.30	100.62
13_1_40cm_scaffold_156901 Species: Methanobacterium sp. MB1 (50%)	2	1300 bp	70.92	4.05	100.62
13_1_40cm_scaffold_84891 Species: Thermoplasmatales archaeon A-plasma (50%)	2	1798 bp	65.46	35.88	100.61
13_1_40cm_scaffold_109025 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	2320 bp	63.97	9.52	100.60
13_1_40cm_scaffold_59952 Species: RBG_19FT_COMBO_Euryarchaeota_69_17_curated (66.67%)	3	3480 bp	63.82	8.22	100.60
13_1_40cm_scaffold_69230 Species: RBG_16_Euryarchaeota_67_27_curated (50%)	2	1989 bp	53.85	11.99	100.60

Displaying items 251-300 of 10569 in total

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

13_1_40CM_1_Euryarchaeota_megabin_63_20

13_1_40CM_1_Euryarchaeota_63_20

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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