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B_1_S1_Biohub_coassembly_k141_5183500

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5183500_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3..539
-----------------
DNA (537bp)
protein (179aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
B_1_S1_Biohub_coassembly_k141_5183500_2
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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798..1622
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G3L3_CHLAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL23396.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
B_1_S1_Biohub_coassembly_k141_5183500_3
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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1826..2290
-----------------
DNA (465bp)
protein (155aa)
NUDIX hydrolase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWS9_HERA2
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABX03330.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
B_1_S1_Biohub_coassembly_k141_5183500_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2328..2870)
-----------------
DNA (543bp)
protein (181aa)
Nitroreductase Tax=Clostridium pasteurianum BC1 RepID=R4K9H8_CLOPA
NAD(P)H oxidase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
B_1_S1_Biohub_coassembly_k141_5183500_5
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2923..3567)
-----------------
DNA (645bp)
protein (215aa)
Methyltransferase type 11 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EHA9_CHLL2
type 11 methyltransferase
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
B_1_S1_Biohub_coassembly_k141_5183500_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

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comp(3696..3947)
-----------------
DNA (252bp)
protein (84aa)
hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_5183500_7
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(4141..5073)
-----------------
DNA (933bp)
protein (311aa)
dly:Dehly_0133 quinolinate synthetase complex subunit A; K03517 quinolinate synthase [EC:2.5.1.72] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
quinolinate synthetase complex subunit A
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5183500_8
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(5263..6051)
-----------------
DNA (789bp)
protein (263aa)
Protein FdhD homolog bin=GWF2_Syntrophobacterales_56_9 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
formate dehydrogenase family accessory protein FdhD
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_5183500_9
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(6041..6487)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F7S1_DESDL
hypothetical protein
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_5183500_10
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

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comp(6491..7585)
-----------------
DNA (1095bp)
protein (365aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tax=CG_Dehalo_02
B_1_S1_Biohub_coassembly_k141_5183500_11
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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comp(7723..8664)
-----------------
DNA (942bp)
protein (314aa)
ppd:Ppro_1707 selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
selenide, water dikinase
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
B_1_S1_Biohub_coassembly_k141_5183500_12
unknown

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comp(8716..8844)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5183500_13
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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9281..10648
-----------------
DNA (1368bp)
protein (456aa)
tro:trd_0422 selA; L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
selA; L-seryl-tRNA(Sec) selenium transferase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5183500_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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10722..12596
-----------------
DNA (1875bp)
protein (625aa)
sti:Sthe_1974 selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
selB; selenocysteine-specific translation elongation factor
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5183500_15
unknown

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comp(12824..13117)
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5183500_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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13544..13777
-----------------
DNA (234bp)
protein (78aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5183500_17
unknown

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comp(13791..14165)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5183500_trna_1
unknown

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comp(14092..14183)
-----------------
DNA (92bp)
transferRNA SeC(p)
Displaying 18 items

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