ggKbase home page

rifcsphigho2_01_scaffold_1054

Search features with annotation key words

Displaying items 31-60 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_1054_31
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(27635..27991)
DNA (357bp) protein (119aa)
id=5103013 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_1054_32
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

28132..28581
DNA (450bp) protein (150aa)
hypothetical protein
id=5800786 Tax=CG_Pacearch_03
id=5800786 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_1054_33
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28610..28777
DNA (168bp) protein (56aa)
id=4845869 Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
rifcsphigho2_01_scaffold_1054_34
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


28925..29410
DNA (486bp) protein (162aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_Pacearch_06
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_1054_35
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


29400..30125
DNA (726bp) protein (242aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Pacearch_03
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5050963 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
LSU ribosomal protein L11P
rifcsphigho2_01_scaffold_1054_36
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

30323..30550
DNA (228bp) protein (76aa)
50S ribosomal protein L37Ae n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI24_PYRYC
50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
50S ribosomal protein L37Ae
rifcsphigho2_01_scaffold_1054_37
unknown

Not on your lists

30747..31199
DNA (453bp) protein (151aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1054_38
unknown

Not on your lists

31230..31403
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1054_39

Not on your lists

31631..31975
DNA (345bp) protein (115aa)
erpK protein; K04798 prefoldin beta subunit id=5050960 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Prefoldin subunit beta
rifcsphigho2_01_scaffold_1054_40
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

32038..32415
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
hypothetical protein; K09152 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_1054_41
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(32522..32995)
DNA (474bp) protein (158aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
rifcsphigho2_01_scaffold_1054_42
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

33030..34958
DNA (1929bp) protein (643aa)
KxYKxGKxW signal domain protein n=1 Tax=Streptococcus sanguinis SK678 RepID=F0FS71_STRSA
Marine sediment metagenome DNA, contig: S03H2_S04299 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
srpA; platelet-binding glycoprotein
rifcsphigho2_01_scaffold_1054_43
unknown

Not on your lists

34976..35344
DNA (369bp) protein (123aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1054_44
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

35381..35941
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787FEB
Marine sediment metagenome DNA, contig: S01H1_S02180 Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_1054_45
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35948..36571
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8AVH4_PLESH
dedA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EON90344.1}; TaxID=1315976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Plesiomonas.;" source="Plesiomonas s
rifcsphigho2_01_scaffold_1054_46
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(36572..37207)
DNA (636bp) protein (212aa)
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_1054_47
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(37245..37796)
DNA (552bp) protein (184aa)
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_1054_48
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(37897..40557)
DNA (2661bp) protein (887aa)
Marine sediment metagenome DNA, contig: S01H1_S08543 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5049528 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_1054_49
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

40959..41318
DNA (360bp) protein (120aa)
Regulatory protein ArsR n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0A9_FERPA
regulatory protein ArsR Tax=CG_Pacearch_03
regulatory protein ArsR
rifcsphigho2_01_scaffold_1054_50
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(41315..41836)
DNA (522bp) protein (174aa)
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_1054_51
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(41867..42388)
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S01H1_S21068 Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_1054_52
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(42358..43332)
DNA (975bp) protein (325aa)
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_1054_53
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(43329..43817)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11110.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
rifcsphigho2_01_scaffold_1054_54
unknown

Not on your lists

comp(43857..44144)
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1054_55
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(44141..45016)
DNA (876bp) protein (292aa)
MucD; K01362 [EC:3.4.21.-] id=5044637 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
HtrA2 peptidase Tax=CG_Pacearch_02
peptidase S1C, Do
rifcsphigho2_01_scaffold_1054_56
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

45098..46429
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
RNA-metabolising metallo-beta-lactamase; K07021 Tax=CG_Pacearch_03
RNA-metabolising metallo-beta-lactamase
rifcsphigho2_01_scaffold_1054_57
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

46429..46836
DNA (408bp) protein (136aa)
Tax=GWA1_OP11_Woesebacteria_41_8_curated
rifcsphigho2_01_scaffold_1054_58
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

46833..47591
DNA (759bp) protein (253aa)
Tax=GWA1_OP11_Woesebacteria_41_8_curated
rifcsphigho2_01_scaffold_1054_59
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

47569..48096
DNA (528bp) protein (176aa)
NEQ238 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MR9_NANEQ id=5103447 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative methylase Tax=CG_Pacearch_03
hypothetical protein
rifcsphigho2_01_scaffold_1054_60
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

48262..48651
DNA (390bp) protein (130aa)
Prefoldin subunit alpha n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=PFDA_METST
prefoldin subunit alpha
Tax=CG_Pacearch_02
Displaying items 31-60 of 85 in total

View Taxonomy