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rifcsphigho2_01_scaffold_6966_31

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(16089..16934)

Top 3 Functional Annotations

Value Algorithm Source
truB; putative tRNA pseudouridine synthase B (EC:4.2.1.70); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=CG_Pacearch_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 279.0
  • Bit_score: 320
  • Evalue 2.20e-84
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 231.0
  • Bit_score: 207
  • Evalue 2.50e-50
truB; tRNA pseudouridine synthase B (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 279.0
  • Bit_score: 196
  • Evalue 9.60e-48

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Taxonomy

CG_Pacearch_06 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 846
ATGAAATCTCAAAAAACAATTCAAGAGTTACTAGAATTCGGAATAATAAATATAGATAAGCCATCGGGACCAACAAGCTTCTGGGTTTCTCAATATGTAAAAAACGCCTTAGGTCTAAGTAAAACATCTCATCTAGGCACCTTAGACCCAATGGTAACAGGAGTTTTACCAGTAGCTCTAAACAGAGCATGCAGATTAAACGAGTACTTAATGCATCGAGATAAAACCTACATAGGGATAATCAGAGTCCACGAAGAAATATCTTTAGAAGACTTGCAAAAATTAGCAGATAGTTTTATAGGTAAAATAACTCAAATGCCTCCAGTGCGCTCAAGTGTAAAGCGAGCCGAACGAGTCCGTGAAATTAAAACATTCAAAATATTAGAGAAAAAAAGAAATGACTTCTTATTTAGTTCGCAAGTGCAAGCAGGAACTTACATTAGAAAATTATGTGACGACTTAGGAAAAAAGATAACTGGCGCACACATGTTAGAACTCAGAAGAGTTCAAGCAGGCATTTTCAAAGAAGACACGGCAATAACTCTTTATCAATTTGATGAACTAGTCGAACAGTACAAAAAAGGAAACGAAGAGCCGTTAAGAAAAATGATAGTTTCAGGTGAGATAGTCTCAACTCTTTTGCCAGTAATTAAAATAAGAAAAGACGTTGTAAAAAAAGTTTTAACAGGAAGCCCAATATTCAAATCATTCCTAGCAGAAGAACCAGATAAAGAAATAAAAGAAGGAGACAAAGTATGTGTCTTCGCAGAAACTCGGTTCATGGGTTGTTATAATTTCATAAACAAAGACGACTTAGTAGCAAAGTCAGAGTTTATTTCGAACTAA
PROTEIN sequence
Length: 282
MKSQKTIQELLEFGIINIDKPSGPTSFWVSQYVKNALGLSKTSHLGTLDPMVTGVLPVALNRACRLNEYLMHRDKTYIGIIRVHEEISLEDLQKLADSFIGKITQMPPVRSSVKRAERVREIKTFKILEKKRNDFLFSSQVQAGTYIRKLCDDLGKKITGAHMLELRRVQAGIFKEDTAITLYQFDELVEQYKKGNEEPLRKMIVSGEIVSTLLPVIKIRKDVVKKVLTGSPIFKSFLAEEPDKEIKEGDKVCVFAETRFMGCYNFINKDDLVAKSEFISN*