ggKbase home page

rifcsphigho2_01_scaffold_12802_17

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: comp(8055..8714)

Top 3 Functional Annotations

Value Algorithm Source
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=CG_Pacearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 203.0
  • Bit_score: 234
  • Evalue 1.20e-58
Base excision DNA repair protein, HhH-GPD family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 id=5103570 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 202.0
  • Bit_score: 224
  • Evalue 1.20e-55
Base excision DNA repair protein, HhH-GPD family similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 201.0
  • Bit_score: 224
  • Evalue 3.30e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_02 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 660
ATGTCAATGAATTTCTTTCTTCAATTAGAAAATGTTTGGATGTGGGTTATGGAACTTAAACGTGCTTTACGCCAGCTTGGTGAACTTAAACGGCTTGGAGGGACTATGAGGCTTGCTGCTGAGTCTTGGGGGGCAGATTGGAAGTGTTTGATTGCTACGGTAATGAGCGCTCAGTCAAGAGATGAGACAACAATTGTTATTGCTTCTGAGCTTTTTTCCAAATATAATTCTTTAGATAAACTTGCTAATGCTAACTATTCTGATGTTTTGCATGTCTTTTCTGGGTTGAATTACAATCGCACTAAGGCTAAGAATGTGATTGCTTGCGCTAAGATGCTTATTGATAGTTTTAATGGCAAGATTCCTCGAGATTTAGATAAATTGATTTTGCTTCCAGGGGTTGGACGCAAGACTGCGAATGTATTTTTATCTGAACATGGCTATCCGGCTATAGGAGTTGATACTCATCTAGCTTATATTTCACAAAAACTCAGTTGGACTAAAAATAAAGACTCTCATAAAATAGAGATGGATCTAAAGAAACTATTCGCTAAAAATGTTTGGTCTAGTGTAAACCCTACAGTGGTTAGGTTCGGTAAGAAGTATACTTCCAGGAAGAAAAAAAATATTATTTTGAAAGAAATTAATAAAATTAATTAA
PROTEIN sequence
Length: 220
MSMNFFLQLENVWMWVMELKRALRQLGELKRLGGTMRLAAESWGADWKCLIATVMSAQSRDETTIVIASELFSKYNSLDKLANANYSDVLHVFSGLNYNRTKAKNVIACAKMLIDSFNGKIPRDLDKLILLPGVGRKTANVFLSEHGYPAIGVDTHLAYISQKLSWTKNKDSHKIEMDLKKLFAKNVWSSVNPTVVRFGKKYTSRKKKNIILKEINKIN*